Pairwise Alignments

Query, 525 a.a., Na+/H+ antiporter NhaC family protein from Methanococcus maripaludis S2

Subject, 440 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 55.5 bits (132), Expect = 4e-12
 Identities = 53/183 (28%), Positives = 89/183 (48%), Gaps = 13/183 (7%)

Query: 295 LFAGVGIIESFLSMDASWGLFWGGLVTLLFTVIYFIVSKAVPAKDIANLFAKGSKLMLPA 354
           + A V I+ + +    +  + +G L+  +     F +S A+      ++F +G ++M   
Sbjct: 241 IIAAVAIVATLVVQLQTDSMIFGALIGFMV----FSLSGAIKHVADQDIFTQGVRMMANI 296

Query: 355 ITILILAWSLGSVIGDLG-TGTYLSSLIQNSLPVQILPAILFLLSGFM-AFSTGTSWGTF 412
             I+I A    +V+   G  G  +SSL +     + L A L LL G +     G+S+ T 
Sbjct: 297 GFIMIAAAGFAAVVKATGDVGNLVSSLGELIGDNKALAAFLMLLVGLLITMGIGSSFSTI 356

Query: 413 GIMLPIAVPMAVGLGMPEFVVPFVAAVLG-GAIYGDHSSPISDTTIMSSTG--AGTKHID 469
            I+  I VP+A+  G   F VP   A++G  A  GD  SP SD+T+  + G  A  +H D
Sbjct: 357 PIIATIYVPLALSFG---FSVPATIALVGTAAALGDAGSPASDSTLGPTAGLNADGQH-D 412

Query: 470 HVQ 472
           H++
Sbjct: 413 HMR 415