Pairwise Alignments

Query, 525 a.a., Na+/H+ antiporter NhaC family protein from Methanococcus maripaludis S2

Subject, 460 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  247 bits (631), Expect = 6e-70
 Identities = 163/498 (32%), Positives = 262/498 (52%), Gaps = 56/498 (11%)

Query: 6   LSLLPPVVAIGLALITKRVYMSLFLGILAGSLLYNNWNIVASASHIVNTIIGSVELTSIT 65
           +SL+PP V + LA+  +R  ++L +G +AG LL +            ++++G+    S+ 
Sbjct: 7   ISLIPPFVVLALAIWLRRPILALIIGAVAGLLLLDP-----------SSVLGNFADASLK 55

Query: 66  GISSFTGVGNLWNLLILLFLVMLGILIALITRAGGALAYGNWASTKIKSKEGASLSTSLL 125
            +   T +G  W   ++L     G LIAL+ R GGALA+G  A    K ++ +   T +L
Sbjct: 56  VMQDET-IG--W---LILVCGSFGALIALLVRTGGALAFGRKAILMAKGRKSSLFMTFVL 109

Query: 126 GILLFIDDYFNCLTVGTVMKPITDKFKISRAKLAYIIDSTAAPVCILMPVSSWFAAVVGN 185
           G+++FIDDY N LTVG  MK +TDKFK+SR  LAY++DSTAAPVC+L+P+S+W     G 
Sbjct: 110 GLVIFIDDYLNALTVGETMKRVTDKFKVSREMLAYVVDSTAAPVCVLVPLSTWAVFFGGL 169

Query: 186 LGESGVGTGALSSMSPSGVFFSAILYNTYALVALFMVSFIISFKKMDFGPMKVHE----- 240
           L ++GV     +      V+ SAI Y  YA +A+ MV  ++       GPMK  E     
Sbjct: 170 LVDNGVA----AEGEAISVYMSAIPYMLYAWLAVIMVLLVVVGVVPAIGPMKKAELAAAQ 225

Query: 241 ----KVATETGDLFNGDA-ETAAIESEIEPL-SGGKISYLVLPLVVLILAIIFAFMISGG 294
               K   +  ++   D     AIE E E     GK+   ++PL +L+     AF +   
Sbjct: 226 GEPAKAQVDWEEVHTSDEYAVKAIEDEFEHADKHGKLHNFLVPLGLLV-----AFTV--- 277

Query: 295 LFAGVGIIESFLSMDASWGLFWGGLVTLLFTVIYFIVSKAVPAKDIANLFAKGSKLMLPA 354
                     +  +D   GL    L TL  T+ Y+ V K +P  ++ +    G K MLPA
Sbjct: 278 ----------YFDIDVWKGL----LATLAVTLPYYAVQKLMPMSEMMDQMIDGFKSMLPA 323

Query: 355 ITILILAWSLGSVIGDLGTGTYLSSLIQNSLPVQILPAILFLLSGFMAFSTGTSWGTFGI 414
           I  ++ A+    V   L    Y+   +   +  ++LPAI+FL    +AF+TG+SWG F +
Sbjct: 324 IGTVVAAFIFKDVCDQLLLPQYVIDTLSPYMTAKMLPAIVFLAMAVLAFATGSSWGIFAV 383

Query: 415 MLPIAVPMAVGLGMPEFVVPFVAAVLGGAIYGDHSSPISDTTIMSSTGAGTKHIDHVQTQ 474
            +PI +P+A  +G    +V  + A+L  + +G  +   SD+T++++ G+G   + H  TQ
Sbjct: 384 TIPIVMPLANAVGADTALV--IGALLSASSFGSQACFYSDSTVLAAQGSGCNLVSHAVTQ 441

Query: 475 LPYTTLIGIMAFLGYLIV 492
           LPY  +   +AF+G++++
Sbjct: 442 LPYALIAAALAFVGFILL 459