Pairwise Alignments

Query, 525 a.a., Na+/H+ antiporter NhaC family protein from Methanococcus maripaludis S2

Subject, 507 a.a., hypothetical Na+/H+ antiporter (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  240 bits (612), Expect = 1e-67
 Identities = 159/496 (32%), Positives = 270/496 (54%), Gaps = 32/496 (6%)

Query: 5   ILSLLPPVVAIGLALITKRVYMSLFLGILAGSLLYNNWNIVASASHIVNTIIGSVELTSI 64
           +L++LP  + + LAL  +R  ++L +GIL+G+L+  +++IV S S+++            
Sbjct: 5   LLAILPLFLTLVLALWLRRTLVALGVGILSGALIIAHFDIVQSVSYLLEI---------- 54

Query: 65  TGISSFTG--VGNLWNLLILLFLVMLGILIALITRAGGALAYGNWASTKIKSKEGASLST 122
            G+  F        W+L +L  +++LG +  L+ R+G    +G+W   +I++   A +  
Sbjct: 55  -GVKQFYSQDAWQWWHLNVLTAMLLLGSMTQLLARSGAVGLFGDWLYRRIRTGRQARVGV 113

Query: 123 SLLGILLFIDDYFNCLTVGTVMKPITDKFKISRAKLAYIIDSTAAPVCILMPVSSWFAAV 182
            LLG L+FID  F+CL VG V +P++ ++ I + +LAY++DS A+P+C L+P SSW   V
Sbjct: 114 VLLGWLVFIDGIFSCLAVGHVCQPLSQRYGIRQEQLAYLVDSNASPLCSLLPFSSWGPYV 173

Query: 183 VGNL-GESGVGTGALSSMSPSGVFFSAILYNTYALVALFMVSFIISFKKMDFGPMKVHEK 241
           +  L G S +   AL +      F    L N YA+  L + S I+++  + F P++    
Sbjct: 174 MALLAGLSFLPVSALEA------FIEVALSNFYAITTLGL-SLIVAWFGVGFRPIESAVL 226

Query: 242 VATETGDLFNGDAETAAIESEIEPLSGGKISYLVLPLVVLILAIIFAFMISGGLFAGVGI 301
           +A E   +   D           P S G    L +P++ L+ A +   + SG        
Sbjct: 227 MAAEPSKVTQMDI--------APPSSQGNPWLLAIPMLTLLCASVGLTLWSGAQQVPAWD 278

Query: 302 IESFL-SMDASWGLFWGGLVTLLFTVIYFIVSKAVPAKDIANLFAKGSKLMLPAITILIL 360
           I ++L S D    +    L++ L T+   I+S     K + +L A G +++  AI IL+ 
Sbjct: 279 ISAWLASADIGAAMRDACLLSTLVTLGLLIMSGRSIGKLLGDL-AHGVRMIAFAIAILLC 337

Query: 361 AWSLGSVIGDLGTGTYLSSLIQNSLPVQILPAILFLLSGFMAFSTGTSWGTFGIMLPIAV 420
            W +G+VI DLG  + L+   +  L   +L A +FLL   MAF+TG+SWGTF IM+PI  
Sbjct: 338 TWMIGAVIQDLGVASLLADWAKWYLSPSLLVAGMFLLCAIMAFATGSSWGTFAIMIPIGG 397

Query: 421 PMAVGLGMPEFVVPFVAAVLGGAIYGDHSSPISDTTIMSSTGAGTKHIDHVQTQLPYTTL 480
            +A  +     ++P ++AV+ G+++GDH SPISDT+++S+T +G    DHV TQLP+  +
Sbjct: 398 EIAHNMD-ASLLLPVLSAVMAGSVFGDHCSPISDTSVLSATSSGCLPHDHVVTQLPFALI 456

Query: 481 IGIMAFLGYLIVGYTI 496
               A +G+ +V  ++
Sbjct: 457 AAFAALVGFQLVNLSV 472