Pairwise Alignments

Query, 525 a.a., Na+/H+ antiporter NhaC family protein from Methanococcus maripaludis S2

Subject, 440 a.a., methionine transporter from the Na+/H+ antiporter superfamily (Dmitry Rodionov) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 63.5 bits (153), Expect = 1e-14
 Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 22/219 (10%)

Query: 295 LFAGVGIIESFLSMDASWGLFWGGLVTLLFTVIYFIVSKAVPAKDIANLFAKGSKL-MLP 353
           LF G G I SF  +  ++      +  L    +  I+     +K I  + A   ++ ++ 
Sbjct: 19  LFIGTGSILSFTGVKMAFYELSPAVAILPALALALIMGHGGLSKKINIMLAGAGEINIIT 78

Query: 354 AITILILAWSLGSVIGDLGTGTYLSSLIQNSLPVQILPAILFLLSGFMAFSTGTSWGTFG 413
              I +LA    SV   +G      +L  + +P + +   LFL++ F++ + GTS GT  
Sbjct: 79  MCVIYLLAGGFASVAKAIGGVDATVNLGLSLIPAEFILPGLFLIAAFVSTAMGTSMGTIA 138

Query: 414 IMLPIAVPMA----VGLGMPEFVVPFVAAVLGGAIYGDHSSPISDTTIMSSTGAGTKHID 469
            + PIAV +     +GL M       + +V+GGA++GD+ S ISDTTI ++   G +  D
Sbjct: 139 AVGPIAVGIGQQTDIGLAM------LMGSVVGGAMFGDNLSMISDTTIAATRTQGCEMGD 192

Query: 470 HVQTQLPYTTLIGIMAFLGYLIV-------GYTINLGYW 501
             +  L    LI + A +G  ++       G    +G W
Sbjct: 193 KFRMNL----LIALPAAVGATLLFWLMGDSGQAARVGAW 227



 Score = 26.2 bits (56), Expect = 0.003
 Identities = 45/220 (20%), Positives = 88/220 (40%), Gaps = 26/220 (11%)

Query: 8   LLPPVVAIGLALITKRVYMSLFLGIL----AGSLLYNNWNIVASASHIVNTIIGSVELTS 63
           +LP VV + +AL    V++ LF GI+     G  +   ++++  A  I     G  E+  
Sbjct: 232 VLPYVVILAMALAGMNVFVVLFTGIVLAGGVGVAVVPGYSVLQWAKDIYAGFSGMHEILV 291

Query: 64  ITGISSFTGVGNLWNLLILLFLVMLGILIALITRAGGALAYGNWASTKIKSKEGASLSTS 123
           ++ +    G+G L        +   G L  L+ R G   +      T+   + G SL  S
Sbjct: 292 LSMLMG--GLGEL--------IRYQGGLAWLLERIGRMTSDRRDGRTRRLGEAGISLLVS 341

Query: 124 LLGILLFIDDYFNCLTVGTVMKPITDKFKISRAKLAYIIDSTAAPVCILMPVSSWFAAVV 183
           L   L   ++    +  G + + + +   +   + A ++D  +  V  L+P         
Sbjct: 342 LAN-LCTANNTVAIILTGGMARGLAETNGVDPRRSASMLDIFSCVVQGLIP--------- 391

Query: 184 GNLGESGVGTGALSSMSPSGVFFSAILYNTYALVALFMVS 223
              G   +  G+++ +SP  V  S +      + AL  ++
Sbjct: 392 --YGAQVLLAGSIAGISPVDVSLSNMYCYLLCVAALASIA 429