Pairwise Alignments

Query, 409 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 295 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 76.6 bits (187), Expect = 9e-19
 Identities = 46/200 (23%), Positives = 90/200 (45%)

Query: 198 NGKGLCCEKKEQYTMAVECFDKAVIQDECYYDAIYNKGISCYKSKKYSCAISCFEKALDL 257
           N +G    +  ++  AV  FD+A+  +  +Y A  N+ +          A++ +  AL +
Sbjct: 82  NVRGSAYGRAGEFRRAVADFDQAIQLNPRFYQAYANRALVQRNLGNQQAALADYNAALQI 141

Query: 258 NNSNPYCYFYKADSLNRLGEYEKAVLNYKKAIELDSKNPIFWSGLGLSYNYLNEYNSSIQ 317
           N +    Y  + +   +  + + A  ++ KAIELD+ +P  +   GL Y   N++  +I+
Sbjct: 142 NPNYDVAYIGRGNLYRQANQLDAAFNDFNKAIELDTADPRAYHNRGLIYQARNQHAQAIE 201

Query: 318 SYEKAVELNPEDDISWSNLGYLQYKNKNYNESISYFEKSLDLNSNNKYAWNGLGNSYLLL 377
            + KA+ L+P     ++  G       + + + S F  +++LN     +W      Y   
Sbjct: 202 DFSKAISLSPSSPEPYNGRGISYVAQGDDDNAFSDFNTAINLNGKLAESWANQALIYERR 261

Query: 378 KNYEKALMCYDKAIEIDPLY 397
            +  KA   Y  A+ +DP Y
Sbjct: 262 GDKAKAAKSYSHALSLDPKY 281



 Score = 64.3 bits (155), Expect = 4e-15
 Identities = 35/153 (22%), Positives = 76/153 (49%)

Query: 248 ISCFEKALDLNNSNPYCYFYKADSLNRLGEYEKAVLNYKKAIELDSKNPIFWSGLGLSYN 307
           I+     +  N S+P  Y  +  +  R GE+ +AV ++ +AI+L+ +    ++   L   
Sbjct: 64  IASLSSVIASNPSDPEGYNVRGSAYGRAGEFRRAVADFDQAIQLNPRFYQAYANRALVQR 123

Query: 308 YLNEYNSSIQSYEKAVELNPEDDISWSNLGYLQYKNKNYNESISYFEKSLDLNSNNKYAW 367
            L    +++  Y  A+++NP  D+++   G L  +    + + + F K+++L++ +  A+
Sbjct: 124 NLGNQQAALADYNAALQINPNYDVAYIGRGNLYRQANQLDAAFNDFNKAIELDTADPRAY 183

Query: 368 NGLGNSYLLLKNYEKALMCYDKAIEIDPLYNEP 400
           +  G  Y     + +A+  + KAI + P   EP
Sbjct: 184 HNRGLIYQARNQHAQAIEDFSKAISLSPSSPEP 216



 Score = 60.8 bits (146), Expect = 5e-14
 Identities = 45/208 (21%), Positives = 91/208 (43%), Gaps = 11/208 (5%)

Query: 25  STYAEMGEQCYLEKDYETSVKCFDKALELDPD--NTCSLEYLGKYSMENRNLDMAEIYFG 82
           S Y   GE       +  +V  FD+A++L+P      +   L + ++ N+   +A+  + 
Sbjct: 86  SAYGRAGE-------FRRAVADFDQAIQLNPRFYQAYANRALVQRNLGNQQAALAD--YN 136

Query: 83  RLIELEPENKCALKSLGEIHLSQEEYDKALYYYNKLLEIDNSVGKTWFYKGICLKMLGNY 142
             +++ P    A    G ++    + D A   +NK +E+D +  + +  +G+  +    +
Sbjct: 137 AALQINPNYDVAYIGRGNLYRQANQLDAAFNDFNKAIELDTADPRAYHNRGLIYQARNQH 196

Query: 143 DESVEAFDKSTGDYETLFLTWNDLGYCYYQNGEYDKAIGCFDKALTLDGNLKYSLNGKGL 202
            +++E F K+     +    +N  G  Y   G+ D A   F+ A+ L+G L  S   + L
Sbjct: 197 AQAIEDFSKAISLSPSSPEPYNGRGISYVAQGDDDNAFSDFNTAINLNGKLAESWANQAL 256

Query: 203 CCEKKEQYTMAVECFDKAVIQDECYYDA 230
             E++     A + +  A+  D  Y  A
Sbjct: 257 IYERRGDKAKAAKSYSHALSLDPKYEPA 284



 Score = 52.4 bits (124), Expect = 2e-11
 Identities = 27/116 (23%), Positives = 58/116 (50%)

Query: 279 EKAVLNYKKAIELDSKNPIFWSGLGLSYNYLNEYNSSIQSYEKAVELNPEDDISWSNLGY 338
           E+ + +    I  +  +P  ++  G +Y    E+  ++  +++A++LNP    +++N   
Sbjct: 61  EENIASLSSVIASNPSDPEGYNVRGSAYGRAGEFRRAVADFDQAIQLNPRFYQAYANRAL 120

Query: 339 LQYKNKNYNESISYFEKSLDLNSNNKYAWNGLGNSYLLLKNYEKALMCYDKAIEID 394
           +Q    N   +++ +  +L +N N   A+ G GN Y      + A   ++KAIE+D
Sbjct: 121 VQRNLGNQQAALADYNAALQINPNYDVAYIGRGNLYRQANQLDAAFNDFNKAIELD 176