Pairwise Alignments

Query, 409 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 609 a.a., signal peptide protein from Sinorhizobium meliloti 1021

 Score = 61.6 bits (148), Expect = 6e-14
 Identities = 38/140 (27%), Positives = 77/140 (55%), Gaps = 2/140 (1%)

Query: 265 YFYKADSLNRLGEYEKAVLNYKKAIELDSKNPIFWSGLGLSYNYLN-EYNSSIQSYEKAV 323
           +F +  +  R   +EKA  N++KA+EL+   P   + LG S+  +N      ++   KAV
Sbjct: 431 FFQRGIAYERQKLWEKAEPNFRKALELNPDQPQVLNYLGYSWVDMNINLEDGLEMIRKAV 490

Query: 324 ELNPEDDISWSNLGYLQYKNKNYNESISYFEKSLDLNSNNKYAWNGLGNSYLLLKNYEKA 383
           EL P+D     +LG+  ++   ++E+++  E++ +L + +    + LG++Y  +    +A
Sbjct: 491 ELKPDDGYIVDSLGWAYFRMNRFDEAVTELERAAELMAGDATINDHLGDAYWRVGRKLEA 550

Query: 384 LMCYDKAIEIDPLYNE-PKI 402
           +  +++A+E+ P   E PKI
Sbjct: 551 VFQWNQALELKPEEAEIPKI 570



 Score = 45.4 bits (106), Expect = 5e-09
 Identities = 34/140 (24%), Positives = 70/140 (50%), Gaps = 10/140 (7%)

Query: 17  PLPITESSSTYAEMGEQCYLEKDYETSVKCFDKALELDPDNTCSLEYLGKYSMENRNLDM 76
           P+P     + + + G     +K +E +   F KALEL+PD    L YLG YS  + N+++
Sbjct: 421 PVPKRSDWTVFFQRGIAYERQKLWEKAEPNFRKALELNPDQPQVLNYLG-YSWVDMNINL 479

Query: 77  AE--IYFGRLIELEPENKCALKSLGEIHLSQEEYDKALYYYNKLLE-------IDNSVGK 127
            +      + +EL+P++   + SLG  +     +D+A+    +  E       I++ +G 
Sbjct: 480 EDGLEMIRKAVELKPDDGYIVDSLGWAYFRMNRFDEAVTELERAAELMAGDATINDHLGD 539

Query: 128 TWFYKGICLKMLGNYDESVE 147
            ++  G  L+ +  +++++E
Sbjct: 540 AYWRVGRKLEAVFQWNQALE 559



 Score = 42.0 bits (97), Expect = 5e-08
 Identities = 56/254 (22%), Positives = 104/254 (40%), Gaps = 18/254 (7%)

Query: 50  ALELDPDNTCSLEYLGKYSMENRNLDMAEIYFGRLIELEPENKCALKSLGEIHLSQEEYD 109
           A  LDP++   L  LG  +   +  + A   +  + E  P  + +   LG       + D
Sbjct: 313 ARRLDPESADILVMLGGIAENLKKPEEAIELYKSVPESSPMRRLSELQLGLSLAGIGKVD 372

Query: 110 KALYYYNKLLEIDNSVGKTWFYKGICLKMLGNYDESVEAFDKST---------GDYETLF 160
           +A  +   L+++D    + +   G  L    NY E  E +D++           D+   F
Sbjct: 373 EAKKHLKGLIDVDPKNIRNYLAYGSVLSDAKNYKEMGELYDRAVAAIGPVPKRSDWTVFF 432

Query: 161 LTWNDLGYCYYQNGEYDKAIGCFDKALTLDGNLKYSLNGKGLC-CEKKEQYTMAVECFDK 219
                 G  Y +   ++KA   F KAL L+ +    LN  G    +        +E   K
Sbjct: 433 ----QRGIAYERQKLWEKAEPNFRKALELNPDQPQVLNYLGYSWVDMNINLEDGLEMIRK 488

Query: 220 AV--IQDECYYDAIYNKGISCYKSKKYSCAISCFEKALDLNNSNPYCYFYKADSLNRLGE 277
           AV    D+ Y   + + G + ++  ++  A++  E+A +L   +     +  D+  R+G 
Sbjct: 489 AVELKPDDGY--IVDSLGWAYFRMNRFDEAVTELERAAELMAGDATINDHLGDAYWRVGR 546

Query: 278 YEKAVLNYKKAIEL 291
             +AV  + +A+EL
Sbjct: 547 KLEAVFQWNQALEL 560



 Score = 31.2 bits (69), Expect = 9e-05
 Identities = 28/121 (23%), Positives = 52/121 (42%)

Query: 271 SLNRLGEYEKAVLNYKKAIELDSKNPIFWSGLGLSYNYLNEYNSSIQSYEKAVELNPEDD 330
           +LNR G  +   L  + A  LD ++      LG     L +   +I+ Y+   E +P   
Sbjct: 296 ALNREGAEDIVSLYLQTARRLDPESADILVMLGGIAENLKKPEEAIELYKSVPESSPMRR 355

Query: 331 ISWSNLGYLQYKNKNYNESISYFEKSLDLNSNNKYAWNGLGNSYLLLKNYEKALMCYDKA 390
           +S   LG         +E+  + +  +D++  N   +   G+     KNY++    YD+A
Sbjct: 356 LSELQLGLSLAGIGKVDEAKKHLKGLIDVDPKNIRNYLAYGSVLSDAKNYKEMGELYDRA 415

Query: 391 I 391
           +
Sbjct: 416 V 416



 Score = 27.3 bits (59), Expect = 0.001
 Identities = 20/81 (24%), Positives = 35/81 (43%)

Query: 41  ETSVKCFDKALELDPDNTCSLEYLGKYSMENRNLDMAEIYFGRLIELEPENKCALKSLGE 100
           E  ++   KA+EL PD+   ++ LG         D A     R  EL   +      LG+
Sbjct: 480 EDGLEMIRKAVELKPDDGYIVDSLGWAYFRMNRFDEAVTELERAAELMAGDATINDHLGD 539

Query: 101 IHLSQEEYDKALYYYNKLLEI 121
            +       +A++ +N+ LE+
Sbjct: 540 AYWRVGRKLEAVFQWNQALEL 560