Pairwise Alignments

Query, 409 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 448 a.a., methyltransferase from Herbaspirillum seropedicae SmR1

 Score = 52.8 bits (125), Expect = 2e-11
 Identities = 31/134 (23%), Positives = 68/134 (50%)

Query: 227 YYDAIYNKGISCYKSKKYSCAISCFEKALDLNNSNPYCYFYKADSLNRLGEYEKAVLNYK 286
           +Y+A+  + I  + + +   A + +E  L+ +  +P    Y    L++ G++++A+   +
Sbjct: 17  HYEALLRQAIDAHMAGRLDQACAIYEAVLEADPIHPLALHYYGIWLHQDGQHDEALDKLE 76

Query: 287 KAIELDSKNPIFWSGLGLSYNYLNEYNSSIQSYEKAVELNPEDDISWSNLGYLQYKNKNY 346
            A  L+  N  + +  G     L +   + Q+Y  A+ L P+D   W+NLG +  +    
Sbjct: 77  LASALEPDNADWHNDRGNVLFALQQPALAEQAYADALALRPDDHTIWNNLGAVLLQQDKR 136

Query: 347 NESISYFEKSLDLN 360
            ++IS FE++L ++
Sbjct: 137 PDAISAFERALQID 150



 Score = 41.6 bits (96), Expect = 5e-08
 Identities = 28/105 (26%), Positives = 48/105 (45%)

Query: 45  KCFDKALELDPDNTCSLEYLGKYSMENRNLDMAEIYFGRLIELEPENKCALKSLGEIHLS 104
           + +  AL L PD+      LG   ++      A   F R ++++P+   +L  LG IH +
Sbjct: 107 QAYADALALRPDDHTIWNNLGAVLLQQDKRPDAISAFERALQIDPDFLPSLLHLGGIHEA 166

Query: 105 QEEYDKALYYYNKLLEIDNSVGKTWFYKGICLKMLGNYDESVEAF 149
             +  +A +Y  +   +    GK+W   GI    LG   E+ EA+
Sbjct: 167 AGDKMQASHYQCRAYVLPPLEGKSWEMLGISFYFLGRLPEAAEAY 211



 Score = 35.8 bits (81), Expect = 3e-06
 Identities = 36/183 (19%), Positives = 77/183 (42%)

Query: 213 AVECFDKAVIQDECYYDAIYNKGISCYKSKKYSCAISCFEKALDLNNSNPYCYFYKADSL 272
           A   ++  +  D  +  A++  GI  ++  ++  A+   E A  L   N   +  + + L
Sbjct: 37  ACAIYEAVLEADPIHPLALHYYGIWLHQDGQHDEALDKLELASALEPDNADWHNDRGNVL 96

Query: 273 NRLGEYEKAVLNYKKAIELDSKNPIFWSGLGLSYNYLNEYNSSIQSYEKAVELNPEDDIS 332
             L +   A   Y  A+ L   +   W+ LG      ++   +I ++E+A++++P+   S
Sbjct: 97  FALQQPALAEQAYADALALRPDDHTIWNNLGAVLLQQDKRPDAISAFERALQIDPDFLPS 156

Query: 333 WSNLGYLQYKNKNYNESISYFEKSLDLNSNNKYAWNGLGNSYLLLKNYEKALMCYDKAIE 392
             +LG +     +  ++  Y  ++  L      +W  LG S+  L    +A   Y   + 
Sbjct: 157 LLHLGGIHEAAGDKMQASHYQCRAYVLPPLEGKSWEMLGISFYFLGRLPEAAEAYRAWLR 216

Query: 393 IDP 395
            +P
Sbjct: 217 EEP 219



 Score = 29.3 bits (64), Expect = 2e-04
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 8/128 (6%)

Query: 74  LDMAEIYFGRLIELEPENKCALKSLGEIHLSQE-EYDKALYYYN--KLLEIDNSVGKTWF 130
           LD A   +  ++E +P +  AL   G I L Q+ ++D+AL        LE DN+    W 
Sbjct: 34  LDQACAIYEAVLEADPIHPLALHYYG-IWLHQDGQHDEALDKLELASALEPDNA---DWH 89

Query: 131 Y-KGICLKMLGNYDESVEAFDKSTGDYETLFLTWNDLGYCYYQNGEYDKAIGCFDKALTL 189
             +G  L  L     + +A+  +          WN+LG    Q  +   AI  F++AL +
Sbjct: 90  NDRGNVLFALQQPALAEQAYADALALRPDDHTIWNNLGAVLLQQDKRPDAISAFERALQI 149

Query: 190 DGNLKYSL 197
           D +   SL
Sbjct: 150 DPDFLPSL 157