Pairwise Alignments

Query, 409 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 209 a.a., TPR domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 55.5 bits (132), Expect = 1e-12
 Identities = 30/97 (30%), Positives = 51/97 (52%)

Query: 311 EYNSSIQSYEKAVELNPEDDISWSNLGYLQYKNKNYNESISYFEKSLDLNSNNKYAWNGL 370
           E  + I   E+AV  NP+D  +W++LG+L +      E+I  +E+SL L  N+      L
Sbjct: 70  EVMNRILELEQAVIKNPQDADAWTHLGHLYFDTHQAKEAIRAYERSLALKPNDPDVITDL 129

Query: 371 GNSYLLLKNYEKALMCYDKAIEIDPLYNEPKISKSSI 407
           G  +     ++KAL  +DKA+ I+P +     +K  +
Sbjct: 130 GVMFRADHQHDKALAAFDKAVSINPKHEIALFNKGIV 166



 Score = 44.7 bits (104), Expect = 3e-09
 Identities = 30/130 (23%), Positives = 68/130 (52%), Gaps = 8/130 (6%)

Query: 272 LNRLGEYEKAVLNYKKAIELDSKNPIFWSGLGLSYNYLNEYNSSIQSYEKAVELNPEDDI 331
           +NR+ E E+AV+  K   + D+     W+ LG  Y   ++   +I++YE+++ L P D  
Sbjct: 72  MNRILELEQAVI--KNPQDADA-----WTHLGHLYFDTHQAKEAIRAYERSLALKPNDPD 124

Query: 332 SWSNLGYLQYKNKNYNESISYFEKSLDLNSNNKYAWNGLG-NSYLLLKNYEKALMCYDKA 390
             ++LG +   +  ++++++ F+K++ +N  ++ A    G   Y  ++  ++ L  + K 
Sbjct: 125 VITDLGVMFRADHQHDKALAAFDKAVSINPKHEIALFNKGIVLYFDMEKKDEGLAVWRKL 184

Query: 391 IEIDPLYNEP 400
           +  +P    P
Sbjct: 185 LSTNPAAKAP 194



 Score = 44.7 bits (104), Expect = 3e-09
 Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 1/97 (1%)

Query: 163 WNDLGYCYYQNGEYDKAIGCFDKALTLDGNLKYSLNGKGLCCEKKEQYTMAVECFDKAVI 222
           W  LG+ Y+   +  +AI  ++++L L  N    +   G+      Q+  A+  FDKAV 
Sbjct: 92  WTHLGHLYFDTHQAKEAIRAYERSLALKPNDPDVITDLGVMFRADHQHDKALAAFDKAVS 151

Query: 223 QDECYYDAIYNKGISCY-KSKKYSCAISCFEKALDLN 258
            +  +  A++NKGI  Y   +K    ++ + K L  N
Sbjct: 152 INPKHEIALFNKGIVLYFDMEKKDEGLAVWRKLLSTN 188



 Score = 33.9 bits (76), Expect = 4e-06
 Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 3/120 (2%)

Query: 19  PITESSSTYAEMGEQCYLEKDYETSVKCFD--KALELDPDNTCSLEYLGKYSMENRNLDM 76
           P+T+   + A  GEQ   +   E   +  +  +A+  +P +  +  +LG    +      
Sbjct: 49  PVTKKQVS-APSGEQATSQVPPEVMNRILELEQAVIKNPQDADAWTHLGHLYFDTHQAKE 107

Query: 77  AEIYFGRLIELEPENKCALKSLGEIHLSQEEYDKALYYYNKLLEIDNSVGKTWFYKGICL 136
           A   + R + L+P +   +  LG +  +  ++DKAL  ++K + I+       F KGI L
Sbjct: 108 AIRAYERSLALKPNDPDVITDLGVMFRADHQHDKALAAFDKAVSINPKHEIALFNKGIVL 167