Pairwise Alignments

Query, 409 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 371 a.a., TPR domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 53.9 bits (128), Expect = 8e-12
 Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 4/144 (2%)

Query: 47  FDKALELDPDNTCSLEYLGKYSMENRNLDMAEIYFGRLIELEPENKCALKSLGEIHLSQE 106
           F +A+ LDPD      +LG         D+A   +   +   P++     +LG       
Sbjct: 163 FTRAITLDPDLASCYAHLGAVHDYKGRPDLARDVYAAALVRFPQSGELHNNLGVAFSMLG 222

Query: 107 EYDKALYYYNKLLEIDNSVGKTWFYKGICLKMLGNYDESVEAFDKSTGDYETLFLTWNDL 166
           +   AL+++++ + +  S  ++W   G+ L  LG +DE+ EAF  + G+        N+L
Sbjct: 223 DDASALHHFHEAVVLGASSERSWNNMGLALCRLGRFDEAFEAFRNAGGE----AAAHNNL 278

Query: 167 GYCYYQNGEYDKAIGCFDKALTLD 190
           GY +  NG+   A+    +A+ L+
Sbjct: 279 GYFFLVNGDASLAVQHLQRAVELE 302



 Score = 45.4 bits (106), Expect = 3e-09
 Identities = 32/147 (21%), Positives = 67/147 (45%), Gaps = 4/147 (2%)

Query: 251 FEKALDLNNSNPYCYFYKADSLNRLGEYEKAVLNYKKAIELDSKNPIFWSGLGLSYNYLN 310
           F +A+ L+     CY +     +  G  + A   Y  A+    ++    + LG++++ L 
Sbjct: 163 FTRAITLDPDLASCYAHLGAVHDYKGRPDLARDVYAAALVRFPQSGELHNNLGVAFSMLG 222

Query: 311 EYNSSIQSYEKAVELNPEDDISWSNLGYLQYKNKNYNESISYFEKSLDLNSNNKYAWNGL 370
           +  S++  + +AV L    + SW+N+G    +   ++E+   F  +         A N L
Sbjct: 223 DDASALHHFHEAVVLGASSERSWNNMGLALCRLGRFDEAFEAFRNA----GGEAAAHNNL 278

Query: 371 GNSYLLLKNYEKALMCYDKAIEIDPLY 397
           G  +L+  +   A+    +A+E++P Y
Sbjct: 279 GYFFLVNGDASLAVQHLQRAVELEPRY 305



 Score = 38.5 bits (88), Expect = 3e-07
 Identities = 36/165 (21%), Positives = 72/165 (43%), Gaps = 4/165 (2%)

Query: 163 WNDLGYCYYQNGEYDKAIGCFDKALTLDGNLKYSLNGKGLCCEKKEQYTMAVECFDKAVI 222
           W   G   +  G  D+A   F +A+TLD +L       G   + K +  +A + +  A++
Sbjct: 143 WELAGMVAFDRGLLDEAEADFTRAITLDPDLASCYAHLGAVHDYKGRPDLARDVYAAALV 202

Query: 223 QDECYYDAIYNKGISCYKSKKYSCAISCFEKALDLNNSNPYCYFYKADSLNRLGEYEKAV 282
           +     +   N G++       + A+  F +A+ L  S+   +     +L RLG +++A 
Sbjct: 203 RFPQSGELHNNLGVAFSMLGDDASALHHFHEAVVLGASSERSWNNMGLALCRLGRFDEAF 262

Query: 283 LNYKKAIELDSKNPIFWSGLGLSYNYLNEYNSSIQSYEKAVELNP 327
             ++ A           + LG  +    + + ++Q  ++AVEL P
Sbjct: 263 EAFRNA----GGEAAAHNNLGYFFLVNGDASLAVQHLQRAVELEP 303