Pairwise Alignments

Query, 409 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 475 a.a., Tetratricopeptide TPR_2 repeat protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 42.7 bits (99), Expect = 2e-08
 Identities = 35/160 (21%), Positives = 69/160 (43%)

Query: 236 ISCYKSKKYSCAISCFEKALDLNNSNPYCYFYKADSLNRLGEYEKAVLNYKKAIELDSKN 295
           +S  + ++   A    E+AL++   N       A    R G  E A  +Y KA++ D +N
Sbjct: 60  MSLVREQRLEEAAPYVERALEVEPGNTTAALMGAQIGVRGGNAEYAEAHYHKALQADPRN 119

Query: 296 PIFWSGLGLSYNYLNEYNSSIQSYEKAVELNPEDDISWSNLGYLQYKNKNYNESISYFEK 355
                GL   +    +  ++I+  + A+E++P+       L  L  + +   E+ +    
Sbjct: 120 MRALMGLARLHGQNQKPEAAIEVLQTALEVDPQSARVRRQLATLLQRTEKTEEAKAQLRA 179

Query: 356 SLDLNSNNKYAWNGLGNSYLLLKNYEKALMCYDKAIEIDP 395
           +L  N N++ A   L N  +   +  +A+   + A+E  P
Sbjct: 180 ALTANPNDQGASVQLANICMRAGDTAEAIQVLETALEAQP 219



 Score = 42.7 bits (99), Expect = 2e-08
 Identities = 21/86 (24%), Positives = 43/86 (50%)

Query: 37  EKDYETSVKCFDKALELDPDNTCSLEYLGKYSMENRNLDMAEIYFGRLIELEPENKCALK 96
           E+  E +    ++ALE++P NT +     +  +   N + AE ++ + ++ +P N  AL 
Sbjct: 65  EQRLEEAAPYVERALEVEPGNTTAALMGAQIGVRGGNAEYAEAHYHKALQADPRNMRALM 124

Query: 97  SLGEIHLSQEEYDKALYYYNKLLEID 122
            L  +H   ++ + A+      LE+D
Sbjct: 125 GLARLHGQNQKPEAAIEVLQTALEVD 150



 Score = 31.6 bits (70), Expect = 5e-05
 Identities = 19/72 (26%), Positives = 34/72 (47%)

Query: 51  LELDPDNTCSLEYLGKYSMENRNLDMAEIYFGRLIELEPENKCALKSLGEIHLSQEEYDK 110
           +E DP +T ++       +  + L+ A  Y  R +E+EP N  A     +I +     + 
Sbjct: 45  IEADPQDTRAMMAFAMSLVREQRLEEAAPYVERALEVEPGNTTAALMGAQIGVRGGNAEY 104

Query: 111 ALYYYNKLLEID 122
           A  +Y+K L+ D
Sbjct: 105 AEAHYHKALQAD 116



 Score = 29.6 bits (65), Expect = 2e-04
 Identities = 29/135 (21%), Positives = 61/135 (45%), Gaps = 3/135 (2%)

Query: 18  LPITESSSTYAEMGEQCYLEK-DYETSVKCFDKALELDPDNTCSLEYLGKYSMENRNLDM 76
           L +   ++T A MG Q  +   + E +   + KAL+ DP N  +L  L +   +N+  + 
Sbjct: 79  LEVEPGNTTAALMGAQIGVRGGNAEYAEAHYHKALQADPRNMRALMGLARLHGQNQKPEA 138

Query: 77  AEIYFGRLIELEPENKCALKSLGEIHLSQEEYDKALYYYNKLLEID-NSVGKTWFYKGIC 135
           A       +E++P++    + L  +    E+ ++A       L  + N  G +     IC
Sbjct: 139 AIEVLQTALEVDPQSARVRRQLATLLQRTEKTEEAKAQLRAALTANPNDQGASVQLANIC 198

Query: 136 LKMLGNYDESVEAFD 150
           ++  G+  E+++  +
Sbjct: 199 MR-AGDTAEAIQVLE 212



 Score = 25.4 bits (54), Expect = 0.004
 Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 4/75 (5%)

Query: 323 VELNPEDDISWSNLGYLQYKNKNYNESISYFEKSLDLNSNNKYAWNGLGNSYLLLK--NY 380
           +E +P+D  +         + +   E+  Y E++L++   N  A   L  + + ++  N 
Sbjct: 45  IEADPQDTRAMMAFAMSLVREQRLEEAAPYVERALEVEPGNTTA--ALMGAQIGVRGGNA 102

Query: 381 EKALMCYDKAIEIDP 395
           E A   Y KA++ DP
Sbjct: 103 EYAEAHYHKALQADP 117