Pairwise Alignments

Query, 220 a.a., 30S ribosomal protein S2 from Methanococcus maripaludis S2

Subject, 257 a.a., 30S ribosomal protein S2 from Phaeobacter inhibens DSM 17395

 Score = 52.0 bits (123), Expect = 1e-11
 Identities = 54/215 (25%), Positives = 91/215 (42%), Gaps = 60/215 (27%)

Query: 14  LASGIHIG--TQQKTEDMRRFIYRVRADGLYVLDVRKTDERLRLAAKFLSNYEPEDIMAV 71
           L +G+H G  TQ+    M  FIY  R +G+++LD+ +T   L  A   +      D +A 
Sbjct: 12  LEAGVHFGHQTQRWNPRMSPFIYGSR-NGIHILDLTQTVPMLDAALNAV-----RDTVAK 65

Query: 72  TRRVYSVG-------PLKEFGKVTGINTVAGRFVPGTLTN-----PSARKFAE------- 112
             RV  VG       P+ +  + +    +  R++ GTLTN      S  +  E       
Sbjct: 66  GGRVLFVGTKRQAAQPIADAAEKSAQYFMNHRWLGGTLTNWKTVSQSINRLKEIDEKMAS 125

Query: 113 ---------------------------------PEVLFLSDPRVDKQALKEAIEIGIPVI 139
                                            P++LF+ D + +  A+ EA ++GIPV+
Sbjct: 126 GAEGLTKKERLGMERDQLKLEASLGGIRDMGGVPDLLFVIDVKKEALAIAEANKLGIPVV 185

Query: 140 GMCDTEHLTAHIDFIIPTNNKGRKSVSLMYYLIAR 174
            + DT      +D+IIP N+   ++++L   L+AR
Sbjct: 186 AIVDTNCSPDGVDYIIPGNDDAARAIALYCDLVAR 220