Pairwise Alignments

Query, 220 a.a., 30S ribosomal protein S2 from Methanococcus maripaludis S2

Subject, 242 a.a., 30S ribosomal protein S2 (RefSeq) from Shewanella loihica PV-4

 Score = 42.4 bits (98), Expect = 8e-09
 Identities = 48/219 (21%), Positives = 86/219 (39%), Gaps = 53/219 (24%)

Query: 14  LASGIHIGTQQK--TEDMRRFIYRVRADGLYVLDVRKTDERLRLAAKFLSNYEPED---I 68
           L +G+H G Q +     M+ FI+  R +G++++++  T      A  F+SN   +    +
Sbjct: 10  LQAGVHFGHQTRYWNPKMKPFIFGAR-NGVHIINLEHTVPMFNEALAFISNVASKKGKVL 68

Query: 69  MAVTRRVYSVGPLKEFGKVTGINTVAGRFVPGTLTN-----PSARKFAE----------- 112
              T+R  S   +KE         V  R++ G LTN      S ++  +           
Sbjct: 69  FVGTKRAASEA-IKEAAISCDQYYVDNRWLGGMLTNWKTVRQSIKRLKDLESQSVDGTFD 127

Query: 113 ------------------------------PEVLFLSDPRVDKQALKEAIEIGIPVIGMC 142
                                         P+V+F+     +  A+KEA  +GIPV+ + 
Sbjct: 128 KLTKKEALMRTRELEKLEKSLGGIKNMGGLPDVIFVIGADHEHIAIKEANNLGIPVVAVV 187

Query: 143 DTEHLTAHIDFIIPTNNKGRKSVSLMYYLIAREYMKNRG 181
           DT      I++I+P N+   +++ L    +A      RG
Sbjct: 188 DTNSSPDGINYIVPGNDDAMRAIRLYAESVAAAAKAGRG 226