Pairwise Alignments

Query, 403 a.a., U32 family peptidase from Methanococcus maripaludis S2

Subject, 331 a.a., Collagenase and related proteases from Pseudomonas stutzeri RCH2

 Score =  108 bits (269), Expect = 3e-28
 Identities = 80/299 (26%), Positives = 140/299 (46%), Gaps = 38/299 (12%)

Query: 2   VELLAPARDLSGLITAFNNGADSVYCGLKE--MSMRATAKNFERNELIEGINFAHDADKR 59
           + L+ PA  L  L  A   GAD++Y G ++   +      N +  +L +G+    +  ++
Sbjct: 1   MHLVCPAGSLPALKAAVQQGADAIYVGFRDDTNARHFAGLNLDEKQLDKGLQLIREKGRQ 60

Query: 60  VYLCTNTVVYEDDILNLNEILEFAKSAEVDAIIVNDIGAM--VTAKELGLEVHVSVQNNI 117
           +Y+  NT    +        ++ A    VDA+I  D G +   + +   L +H+SVQ + 
Sbjct: 61  LYIAVNTYAEPEGWNRWQRAVDQAADMGVDALIAADPGVLGYASKRHPKLNLHLSVQGSA 120

Query: 118 TNSKTAEFFSKF--AKRVVLSRELTLNQIKRIKENLKVNKVDLELEGFIHGALCTAMSGR 175
           TN+    F+ +     R VL R L+L Q+K++  +  V      +E F  G+LC    GR
Sbjct: 121 TNAAALGFYQERYGISRAVLPRVLSLKQVKQVAASSPV-----PIEVFAFGSLCIMAEGR 175

Query: 176 CYLSSYLFNRNAN-CGDCLQPCRRSWK-------------LVNEHADGT---HELISEGK 218
           C+LSSYL   + N CG C       W              L++ +A+G    +  + +G+
Sbjct: 176 CHLSSYLTGESPNLCGVCSPAKAVRWSEEPEGLTSRLNNVLIDRYAEGESAGYPTLCKGR 235

Query: 219 YLLS---------PKDLCMIEHIPEMIDV-FDCFKIEGRAKNVDYVMRATKTYREAIDS 267
           ++++         P  L  ++ IPE+  +     KIEGR ++  YV + T+ +R A+DS
Sbjct: 236 FMVNGQRFHALEEPTSLNTLDLIPELSAIGVTAMKIEGRQRSPAYVEQVTRVWRAALDS 294