Pairwise Alignments

Query, 403 a.a., U32 family peptidase from Methanococcus maripaludis S2

Subject, 666 a.a., Collagenase and related proteases from Pseudomonas stutzeri RCH2

 Score =  152 bits (383), Expect = 4e-41
 Identities = 102/273 (37%), Positives = 150/273 (54%), Gaps = 19/273 (6%)

Query: 2   VELLAPARDLSGLITAFNNGADSVYCGLKEMSMRATAKNFERNELIEGINFAHDADKRVY 61
           +ELLAPARD S    A  +GAD+VY G      R  A+N    ++ E + FAH    RV+
Sbjct: 8   LELLAPARDASIAREAILHGADAVYIGGPSFGARHNAENSVA-DIAELVKFAHLFHARVF 66

Query: 62  LCTNTVVYEDDILNLNEILEFAKSAEVDAIIVNDIGAMVTAKELGL---EVHVSVQNNIT 118
           +  NT++++D++     ++       VDA+IV D+G M    EL +   E+H S Q +I 
Sbjct: 67  VTINTILHDDELDAARTLIHQLYEIGVDALIVQDMGIM----ELDIPPIEIHASTQTDIR 122

Query: 119 NSKTAEFFSKFA-KRVVLSRELTLNQIKRIKENLKVNKVDLELEGFIHGALCTAMSGRCY 177
             + A+F  K    ++VL+REL L +I+ I +     +VD  LE FIHGALC A SG+C 
Sbjct: 123 TLERAKFLDKAGFSQLVLARELNLQEIRAIYD-----EVDSTLEFFIHGALCVAFSGQCN 177

Query: 178 LSSYLFNRNANCGDCLQPCRRSWKLVNEHADGTHELISEGKYLLSPKDLCMIEHIPEMID 237
           +S     R+AN GDC Q CR  + L     D    +++  K+LLS KD     ++  ++D
Sbjct: 178 ISHAQTGRSANRGDCSQACRLPYTL----KDDQGRVVAFEKHLLSMKDNNQSANLSALVD 233

Query: 238 V-FDCFKIEGRAKNVDYVMRATKTYREAIDSVV 269
                FKIEGR K+V YV   T  YR+ +D ++
Sbjct: 234 AGVRSFKIEGRYKDVSYVKNITAYYRQRLDGIL 266