Pairwise Alignments

Query, 403 a.a., U32 family peptidase from Methanococcus maripaludis S2

Subject, 823 a.a., probable proteinase from Synechococcus elongatus PCC 7942

 Score =  179 bits (454), Expect = 3e-49
 Identities = 123/354 (34%), Positives = 184/354 (51%), Gaps = 14/354 (3%)

Query: 3   ELLAPARDLSGLITAFNNGADSVYCGLKEMSMRATAKNFERNELIEGINFAHDADKRVYL 62
           ELLAPA D   L  A  NGAD+VY GL   + R  A NF   +L + +   H    + Y+
Sbjct: 10  ELLAPAGDWDCLRAAIENGADAVYFGLDRFNARMRAHNFTEADLPKVVATLHQRGLKAYV 69

Query: 63  CTNTVVYEDDILNLNEILEFAKSAEVDAIIVNDIGAMVTAKELG--LEVHVSVQNNITNS 120
             NT+++  ++    + L    SA VDA IV D+G     + L     +H S Q  I+++
Sbjct: 70  TLNTLIFPQELPAAEQYLRSIISAGVDAAIVQDVGLCRLIRHLSPTFPIHASTQMTISSA 129

Query: 121 KTAEFFSKFA-KRVVLSRELTLNQIKRIKENLKVNKVDLELEGFIHGALCTAMSGRCYLS 179
               F      + VVL+RE +L +I++I++   V    L LE F+HGALC A SG C  S
Sbjct: 130 AGVAFAHDLGCQLVVLARENSLAEIQKIRQQTTVLNKALPLEVFVHGALCVAYSGACLTS 189

Query: 180 SYLFNRNANCGDCLQPCRRSWKLVNEHADGTHELISEGKYLLSPKDLCMIEHIPEMIDVF 239
             L  R+AN G+C Q CR S+ L+   ADG    + + +YLLSP+DL  IE +PE+I   
Sbjct: 190 EALGGRSANRGECAQACRMSYDLI---ADGQTIDLGDRQYLLSPQDLMGIELLPELIAAG 246

Query: 240 DC-FKIEGRAKNVDYVMRATKTYREAIDSVVDGTYEEKLPIFKKELDKIYNREYDTGFYF 298
            C  KIEGR K  +YV   T+ YREAID    G   E  P  + EL+  ++R   +G+  
Sbjct: 247 VCSLKIEGRLKAPEYVASVTRRYREAIDRAWLGQSTELPPSDRYELEMAFSRGLSSGW-- 304

Query: 299 RDLTCNHDLQYEFEGNVSPYKKIEVGKVVNYFKKVDVAEITLIDDLKVGDSVLI 352
                  D Q   +G  +  + +++G V+   ++    ++  +  ++ GD +LI
Sbjct: 305 ---LQGIDNQALVQGRYAKKRGVDLGSVLAVDRR--GIQVEPLVPIQAGDGLLI 353