Pairwise Alignments

Query, 297 a.a., radical SAM protein from Methanococcus maripaludis S2

Subject, 503 a.a., Nitrogenase cofactor biosynthesis protein NifB (NCBI) from Rhodospirillum rubrum S1H

 Score =  214 bits (544), Expect = 4e-60
 Identities = 111/274 (40%), Positives = 166/274 (60%), Gaps = 10/274 (3%)

Query: 16  HPCYNEKLHHKIGRVHLPVAPKCNIACRFCKRSIGDESVCEDRPGVSHHIMKPAEVENYL 75
           HPCY+E+ HH   R+H+ VAP CNI C +C R    +   E RPGV    + P +    +
Sbjct: 60  HPCYSEEAHHFFARMHVAVAPACNIQCNYCNRKY--DCANESRPGVVSERLTPEQAARKV 117

Query: 76  NDLLEKSPNIKVAGIAGPGDSLFN-EETFETLEVLKEKFPDLVRCLSTNGLLLPKYAERL 134
             +  + P + V G+AGPGDSLF+  +TFET   +    PDL  C+STNGL LP + + L
Sbjct: 118 AAVANELPQLSVLGVAGPGDSLFDARKTFETFARVGAMLPDLKFCISTNGLALPDHLDEL 177

Query: 135 AELGVKTVTVTVNAVDPKIQAQIVDWIYYEGKVYRGEEGAEILIKNQIEGVKKLAEFDVA 194
               +  VT+T+N VDP+I A+I  WIY++G+ + G +GA+IL++ Q+EG++ L    + 
Sbjct: 178 TRHAIDHVTITLNCVDPEIGARIYPWIYFKGRRWTGVDGAKILLERQMEGLEGLIARKIL 237

Query: 195 VKINTVLIPEINMDHIVEIAKTF-EKDAFVHNVIPLIPM------YKMENLRKPTCDEIS 247
           VKIN+V+IP IN  H+ E+ +   EK AF+HNV+PLI        + +   R PT  E+ 
Sbjct: 238 VKINSVMIPGINDHHLPEVNRVIREKGAFLHNVMPLISAPEHGTHFGLTGQRGPTPAELK 297

Query: 248 NIRDTAEEYLHQFRACQQCRADAVGLVTEHKHLE 281
           +++D      +  + C+QCRADA+GL+ E +  E
Sbjct: 298 DLQDRLGGGANLMKHCRQCRADAIGLLGEDRGQE 331