Pairwise Alignments

Query, 297 a.a., radical SAM protein from Methanococcus maripaludis S2

Subject, 331 a.a., Radical SAM (NCBI) from Rhodospirillum rubrum S1H

 Score =  210 bits (534), Expect = 4e-59
 Identities = 112/261 (42%), Positives = 157/261 (60%), Gaps = 6/261 (2%)

Query: 16  HPCYNE--KLHHKIGRVHLPVAPKCNIACRFCKRSIGDESVCEDRPGVSHHIMKPAEVEN 73
           HPC++   + H + GR+HLPV+P CNI C+FC R   D +  + RPGV+  ++KP +  +
Sbjct: 51  HPCFDPAPQAHARAGRLHLPVSPACNITCQFCAR---DFNASDRRPGVARRLLKPEQALD 107

Query: 74  YLNDLLEKSPNIKVAGIAGPGDSLFNEETFETLEVLKEKFPDLVRCLSTNGLLLPKYAER 133
            +   L   P I V GIAGPGD+L      +T  ++   FP L+ CLSTNGL LP  A+ 
Sbjct: 108 VVRRALRLCPEISVVGIAGPGDTLATNHAIDTFALIHADFPTLINCLSTNGLRLPDRAKE 167

Query: 134 LAELGVKTVTVTVNAVDPKIQAQIVDWIYYEGKVYRGEEGAEILIKNQIEGVKKLAEFDV 193
           LA +GV+T+TVTVNAV P+IQA I   I   GK   G E A +LI NQ+EG+ K     +
Sbjct: 168 LAAVGVQTLTVTVNAVAPEIQAVISPVIADRGKRLEGIEAARVLIANQLEGIAKAVALGM 227

Query: 194 AVKINTVLIPEINMDHIVEIA-KTFEKDAFVHNVIPLIPMYKMENLRKPTCDEISNIRDT 252
            VK+N VLIP +N DHI  +A K     A + N+I LIP + + +L  P+   ++  +  
Sbjct: 228 VVKVNCVLIPGVNDDHIGAVAQKVAAAGASLFNIIALIPTHNLAHLPAPSPALLARAQRE 287

Query: 253 AEEYLHQFRACQQCRADAVGL 273
           A  ++  F  CQ+CRADA G+
Sbjct: 288 AGRHISVFTHCQRCRADAAGV 308