Pairwise Alignments

Query, 297 a.a., radical SAM protein from Methanococcus maripaludis S2

Subject, 514 a.a., nitrogenase cofactor biosynthesis protein NifB (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  218 bits (556), Expect = 2e-61
 Identities = 110/273 (40%), Positives = 171/273 (62%), Gaps = 6/273 (2%)

Query: 13  TSVHPCYNEKLHHKIGRVHLPVAPKCNIACRFCKRSIGDESVCEDRPGVSHHIMKPAEVE 72
           T+ HPC+ EK     GRVHLPVAPKCN+ C +C R    + V E RPGV+  ++ PA+  
Sbjct: 7   TTSHPCFTEKAAQSCGRVHLPVAPKCNVLCGYCNRKY--DCVNESRPGVTSGVLTPAQAA 64

Query: 73  NYLNDLLEKSPNIKVAGIAGPGDSLFNEE-TFETLEVLKEKFPDLVRCLSTNGLLLPKYA 131
           +YL+ +LE+ P I+VAGIAGPGD + N   T ETL +++++ PD++ CLS+NGL +P + 
Sbjct: 65  DYLDRVLEREPAIRVAGIAGPGDPMANAAATLETLRLIRQRHPDMLFCLSSNGLGMPPHL 124

Query: 132 ERLAELGVKTVTVTVNAVDPKIQAQIVDWIYYEGKVYRGEEGAEILIKNQIEGVKKLAEF 191
           + LA  GV   T+T+NAVDP I A++  W+     V+RG   AE++++ Q+  +  L + 
Sbjct: 125 DALAANGVTHATLTINAVDPDISARLYTWVRDGKVVWRGRPAAELMLERQLTALTGLVQR 184

Query: 192 DVAVKINTVLIPEINMDHIVEIA-KTFEKDAFVHNVIPLIPMY--KMENLRKPTCDEISN 248
            + VK+NT+L+P IN  H+ ++A K     A + N+IPL P +   +  + +P+ + +  
Sbjct: 185 GIVVKVNTILVPGINDGHVEQVAEKVAALGATLMNIIPLHPTHDTPLAQVAEPSPEAVGE 244

Query: 249 IRDTAEEYLHQFRACQQCRADAVGLVTEHKHLE 281
            R  A  ++ Q   C++CRADAVGL+   +  E
Sbjct: 245 ARRLAGAHIRQMTHCRRCRADAVGLLHHDRSRE 277