Pairwise Alignments

Query, 90 a.a., glycine synthesis protein GlyXS (from data) from Methanococcus maripaludis S2

Subject, 172 a.a., Glycine cleavage system transcriptional antiactivator GcvR from Pseudomonas fluorescens FW300-N1B4

 Score = 39.3 bits (90), Expect = 2e-08
 Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 3/83 (3%)

Query: 1  MENVVITVVGVDKPGIVAEVTKVLAQNSANIVDIRQTIMEDLFTMIMLVDISKISSDFSE 60
          M ++V+TV  +DKPG V  + + +A++  N ++ R + M   F  I+ V +   +  + E
Sbjct: 1  MNHLVLTVFALDKPGQVERIAQCIAEHGGNWLESRMSRMAGQFAGILRVGVP--AEAYDE 58

Query: 61 LNVALEKLGSEIGVKINVQHENI 83
          L  AL+ L ++ G+++ +    I
Sbjct: 59 LVDALKGLSAQ-GIRVMIAESGI 80



 Score = 32.3 bits (72), Expect = 2e-06
 Identities = 21/84 (25%), Positives = 45/84 (53%), Gaps = 7/84 (8%)

Query: 4   VVITVVGVDKPGIVAEVTKVLAQNSAN----IVDIRQTIM--EDLFTMIMLVDISKISSD 57
           + + +VG D+PGIV ++T++L++   N    + ++R   M  E LF    ++ +  ++  
Sbjct: 89  IAMELVGNDRPGIVRDITRLLSEQGVNLESLVTEVRPAPMSSEPLFHAEAILAV-PLTLS 147

Query: 58  FSELNVALEKLGSEIGVKINVQHE 81
              L   LE L  ++ V++ ++ E
Sbjct: 148 LEVLQSRLETLADDLMVELVLRSE 171