Pairwise Alignments

Query, 511 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 584 a.a., Predicted carbamoyl transferase, NodU family from Pseudomonas stutzeri RCH2

 Score =  186 bits (472), Expect = 2e-51
 Identities = 165/560 (29%), Positives = 266/560 (47%), Gaps = 74/560 (13%)

Query: 2   ILGICDG--HNSSASLINEKKVIYAASEERFTRKKNFR---------------GYPVNSI 44
           ILG+     H+ SA+L  + K+I A  EERF R K+ +               G   + +
Sbjct: 5   ILGLSGALSHDPSAALYIDGKLIAAVEEERFVRDKHAKNRMPYESAKFCLEQAGIKPSDV 64

Query: 45  D------------------YGLNSFVNNENKLSAITVGGQFRKGERLKK-----LKILQE 81
           D                  Y    +   +  L AI +G   R+  R KK     L+ L  
Sbjct: 65  DVVAIPFAPISIFEKARWHYAKRYWYAPDRALDAILMGN--RRYYRYKKRIEWCLQQLGF 122

Query: 82  NLE-IPLYYFNHHLCHAAS-YKLSNFKE-CLILTMDGGGDGLSSTLSIGKGSKIETIAQS 138
           +L+ + L    HHL HA+S Y  S F E   IL +DG G+  ++    G+  KI  + + 
Sbjct: 123 DLKKVKLQPVEHHLAHASSAYHCSGFTEKTAILGIDGKGEYATTFFGWGENGKIHKVKEF 182

Query: 139 DLIDSVGDFYASITELLGFKPMEDEGKVMSLSSFESSDSK--INLDTIDYNEKTKSFKNY 196
              DS+G  Y +ITE LGF+ ++ E KVM ++ +  +       L T +  E T + + Y
Sbjct: 183 YDPDSLGGLYGAITEYLGFEMLDGEFKVMGMAPYGDAAKYDFSRLATFENGELTINTE-Y 241

Query: 197 LGVIGSESTKTL-------KRILDYSTPNNSYDIQISKFA------QSKLEEVVLKLLKQ 243
             VIG    K          +++++  P    DI    +       Q+  E++ L+++  
Sbjct: 242 ANVIGFRRYKEKGKGYYFSPKLIEWLGPKREGDIADDPYIHYAAAMQALFEKLALQMMDY 301

Query: 244 F----VDETGIKNIVFSGGVAQNIKLNKKISEQEFVDNLYVPPFTGDEGLSFGSSILCSK 299
           +    + ETG   I F+GG A N+KLN+KI  ++ V  L+V P +GD G + G++   S 
Sbjct: 302 YLGGIIRETG--KIAFAGGCALNVKLNQKIIARDEVKELFVQPASGDAGTAVGAAAYVSV 359

Query: 300 KDF----DLKNTYLGYEIDNYNVEKLVESEKNFKFKYVEEKDIPEIIGSLILNNKLVCVS 355
           +       +++ YLG    N +V        N K  + +  + PE I  ++ +   V   
Sbjct: 360 QRGVPVEKMEHVYLGPSYSNEDVIAACAKHPN-KPVFKQITNTPERIARIMADGNPVAWF 418

Query: 356 RKKMEFGSRALGNRSILGLPTKENTK-KLAKTLK-RNSFMPYAPTILDEYSEIYLKNKLE 413
           + +MEFG RALG RSI+G P+      ++ + +K R  + P+ P++LD  +   LK    
Sbjct: 419 QGRMEFGPRALGGRSIIGCPSVPGVADRINEQIKFRERWRPFCPSMLDTVAPQMLKVDHP 478

Query: 414 SPYMTMLFDCFESNKKDIEGTVHVDGTTRAQTLKKEFNETYYNIINFVNDKTKIPAVLNT 473
           SP+MT  F+  E  K+ +   VH DGT+RAQ L++  N  +Y+++  +   T     LNT
Sbjct: 479 SPFMTFTFEVNEGWKERVGEVVHEDGTSRAQVLERRHNPRWYDLMLELEKLTGNGVSLNT 538

Query: 474 SFNLHGEPIVCSEINAINSF 493
           S N  GEP++CS  +A+N F
Sbjct: 539 SLNRRGEPMICSPTDALNMF 558