Pairwise Alignments

Query, 511 a.a., hypothetical protein from Methanococcus maripaludis S2

Subject, 610 a.a., nodulation protein from Sinorhizobium meliloti 1021

 Score =  193 bits (490), Expect = 2e-53
 Identities = 161/590 (27%), Positives = 269/590 (45%), Gaps = 97/590 (16%)

Query: 9   HNSSASLINEKKVIYAASEERFTRKKNFRGYPVNSIDYGLNSFVNNENKLSAITVGGQ-- 66
           H+S+A++I + +++ AA EERFTRKK+   +P N++ Y L++      ++  +    +  
Sbjct: 11  HDSAAAMIEDGRIVAAAQEERFTRKKHDADFPANAVAYCLSAAECEMTEVDHVVFYDKPI 70

Query: 67  --------------------FRKG------ERLKKLKILQENL-------EIP--LYYFN 91
                               FR        E+L + K+L+  L       E P  L +  
Sbjct: 71  LKFERLLETYLATSPRGFRSFRMAMPLWIKEKLFQKKLLRRYLGKLAGVKEWPGSLLFTE 130

Query: 92  HHLCHAAS-YKLSNFKECLILTMDGGGDGLSSTLSIGKGSKIETIAQSDLIDSVGDFYAS 150
           HHL HAAS +  S F    +LTMDG G+  +++L  G+G  ++ + +     S+G  Y++
Sbjct: 131 HHLAHAASAFFPSPFASAAVLTMDGVGEWCTTSLGHGRGKDLDILKEIRFPHSLGLLYSA 190

Query: 151 ITELLGFKPMEDEGKVMSLSSFE---------------SSDSKINLDT--IDYNEK-TKS 192
            T   GFK    E KVM L+ +                  D    LD    DY    T +
Sbjct: 191 FTYYTGFKVNSGEYKVMGLAPYGRPLFVQKILDHLIDLKEDGSFRLDQRYFDYCAGLTMT 250

Query: 193 FKNYLGVIGSESTKTLKRILDYSTPNNSYDIQISKFAQSKLEEVVLKLLKQFVDETGIKN 252
              +  + G+E  +         +P    ++ ++   Q+  EEVVLKL +    ETG ++
Sbjct: 251 SPAFHELFGAEPRRP-------ESPLTQREMDLAASVQAVTEEVVLKLARFARQETGERH 303

Query: 253 IVFSGGVAQNIKLNKKISEQEFVDNLYVPPFTGDEGLSFGSSI------LCSKKDFD--- 303
           +  +GGVA N   N K+ ++   D++++ P  GD G + GS++      L + +  D   
Sbjct: 304 LCLAGGVALNCVANGKLLKKRIFDDIWIQPAAGDAGGAVGSALAAWHGYLGNGRSPDGRD 363

Query: 304 -LKNTYLGYEIDNYNVEKLVESEKNFKFKYVEEKDIPEIIGSLILNNKLVCVSRKKMEFG 362
            +   YLG   D   VEK + +     +  + + D+       I++ K V   + +MEFG
Sbjct: 364 RMTGAYLGPAFDQREVEKRLTAS-GAVYTVLSDDDLIARTVDAIVDEKAVGWMQGRMEFG 422

Query: 363 SRALGNRSILGLPTKENTKKLA--KTLKRNSFMPYAPTILDEYSEIYLKNKLESPYMTML 420
            RALG RSILG P     +K    K   R SF P+AP++  E    +    ++SPYM ++
Sbjct: 423 PRALGGRSILGDPRSPIMQKTLNLKVKYRESFRPFAPSVRREDVAEWFDVDVDSPYMLLV 482

Query: 421 FDCFESNK--------------------KDIEGTVHVDGTTRAQTLKKEFNETYYNIINF 460
            D  + ++                      I    HVD + R QT+ ++ N  Y+ +++ 
Sbjct: 483 GDVLDRHRLPLGAGEAALFGIDRLNVPRSGIPAVTHVDYSARVQTVHRDTNPRYWELLSA 542

Query: 461 VNDKTKIPAVLNTSFNLHGEPIVCSEINAINSFKKVG-DALLLGNYLIEK 509
              +T  P ++NTSFN+ GEPIVC+  +A   F     + L++GN  + K
Sbjct: 543 FKQRTGCPVLVNTSFNVRGEPIVCTPEDAFRCFMGTEIECLVVGNCFLRK 592