Pairwise Alignments

Query, 314 a.a., malate dehydrogenase from Methanococcus maripaludis S2

Subject, 311 a.a., malate dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 83.2 bits (204), Expect = 7e-21
 Identities = 84/311 (27%), Positives = 148/311 (47%), Gaps = 58/311 (18%)

Query: 1   MDVSIIGASGKIGSVLSLLLAKESHIKNINLIARSSSINKLKGLKMDLYD-AMAAAGQDT 59
           M V+++GA+G IG  L+LLL  +                   G K+ LYD A    G   
Sbjct: 1   MKVAVLGAAGGIGQALALLLKTQLPA----------------GSKLSLYDIAPVTPGVAV 44

Query: 60  DID----------ICCDDDLSCTANSDITIITAGMARTGEMSRIDLMKGNAKIVKNYVKN 109
           D+              +D       +D+ +I+AG+AR   M R DL   NA IV+N ++ 
Sbjct: 45  DLSHIPTAVEIKGFAGEDPTPALVGADVVLISAGVARKPGMDRSDLFNINAGIVRNLIEK 104

Query: 110 IA-NFGDTKIFMISNPVD---LMTYKALIESG-YEKNQVFGLGTHLDSMRFKVAVAKHFE 164
           +A       + +I+NPV+    +  + + ++G Y+KN++FG+ T LD +R +  +A+   
Sbjct: 105 VAVTCPKALVGIITNPVNTTVAIAAEVMKKAGVYDKNRLFGV-TTLDVIRSETFIAELKG 163

Query: 165 VHLDDVRTRIVGEH-GDSMVPVISATAVGGIPIKRLPKYEDFPYEKILERIKGYGQEIIN 223
           +++ DV+  ++G H G +++P++S   V G+       + D     + +RI+  G E++ 
Sbjct: 164 LNVADVKINVIGGHSGVTILPLLS--QVEGV------TFSDEEVASLTKRIQNAGTEVVE 215

Query: 224 LKNGSEYGPASAIVNIVRCIAHDEKRLLTLSTYIEDEIEGIE-----GGC----CIGVPV 274
            K G   G A+  +    C     +  ++L   ++ E   +E     GG         PV
Sbjct: 216 AKAGG--GSATLSMGQAAC-----RFGMSLVRGLQGEANVVECAYVDGGSEHAEFFAQPV 268

Query: 275 KVGKNGIEEVI 285
            +GKNGIE+V+
Sbjct: 269 LLGKNGIEKVL 279