Pairwise Alignments

Query, 314 a.a., malate dehydrogenase from Methanococcus maripaludis S2

Subject, 313 a.a., malate dehydrogenase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  153 bits (387), Expect = 4e-42
 Identities = 99/306 (32%), Positives = 162/306 (52%), Gaps = 9/306 (2%)

Query: 3   VSIIGASGKIGSVLSLLLAKESHIKNINLIARSSSINKLKGLKMDLYDAMAAAGQDTDID 62
           V+++GA G +G+  + +LA       + ++     +++  G  MD+       G DT + 
Sbjct: 4   VTVVGA-GNVGATCANVLAFNEVADEVVMLDVKEGVSE--GKAMDMMQTAQLLGFDTTV- 59

Query: 63  ICCDDDLSCTANSDITIITAGMARTGEMSRIDLMKGNAKIVKNYVKNIANFGDTKIFM-I 121
           + C +D + TANSD+ +IT+G+ R   M+R +L+  NA IVK+  +NI  +    I + I
Sbjct: 60  VGCTNDYAQTANSDVVVITSGIPRKPGMTREELIGVNAGIVKSVAENILKYSPNAILVVI 119

Query: 122 SNPVDLMTYKALIESGYEKNQVFGLGTHLDSMRFKVAVAKHFEVHLDDVRTRIVGEHGD- 180
           SNP+D MTY +L   G  KN++ G+G  LDS RFK  +++    + ++V   ++G HGD 
Sbjct: 120 SNPMDTMTYLSLKALGLPKNRIIGMGGALDSSRFKYFLSQALGCNANEVEGMVIGGHGDT 179

Query: 181 SMVPVISATAVGGIPIKRLPKYEDFPYEKILERIKGYGQEIINLKNGSEYGPASAIVNIV 240
           +M+P+       G+P+      E    E     + G       L   + Y P +A   +V
Sbjct: 180 TMIPLTRFATYKGMPVTNFISEEKL-NEVAAATMVGGATLTKLLGTSAWYAPGAAGAFVV 238

Query: 241 RCIAHDEKRLLTLSTYIEDEIEGIEGGCCIGVPVKVGKNGIEEVIHIKMEDDEIEGFKKS 300
             I HD+K+++  S Y+E E    E   CIGVPV +GKNGIE+++ + +  DE   F  S
Sbjct: 239 ESILHDQKKMIPCSVYLEGEYG--ESDICIGVPVILGKNGIEKIVELDLNADEKAKFAAS 296

Query: 301 FELVKG 306
            + V G
Sbjct: 297 AKAVHG 302