Pairwise Alignments

Query, 314 a.a., malate dehydrogenase from Methanococcus maripaludis S2

Subject, 333 a.a., malate dehydrogenase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 82.4 bits (202), Expect = 1e-20
 Identities = 88/323 (27%), Positives = 147/323 (45%), Gaps = 50/323 (15%)

Query: 3   VSIIGASGKIGSVLSLLLAKESHIKNINLIARSSSINKLKGLKMDLYDAMAAA--GQDTD 60
           ++I+GA+G IGS +                A+++ + KL    + LYD  A A  G   +
Sbjct: 9   LTIVGAAGMIGSNM----------------AQTAMMMKLTP-NICLYDPFAPALEGVAEE 51

Query: 61  IDICCDDDLSCTANSDIT---------IITAGMARTGEMSRIDLMKGNAKIVKNYVKNIA 111
           +  C  + ++ T  SDI          + + G AR   M+R DL+KGNA+I   + K++ 
Sbjct: 52  LYHCGFEGVNLTYTSDIKEALTGASYIVSSGGAARKAGMTREDLLKGNAEIAAQFGKDVR 111

Query: 112 NF--GDTKIFMISNPVDLMTYKALIESGYEKNQVFGLGTHLDSMRFKVAVAKHFEVHLDD 169
            +      I +I NP D+     L+ SG + +QV  L   LDS R +  + K+F +   D
Sbjct: 112 QYCPNVKHIVVIFNPADITGLITLLYSGLKPSQVSTLAA-LDSTRLQNELVKYFHIPASD 170

Query: 170 VRT-RIVGEHGDSMVPVISATAVGGIPI------KRLPKYEDFPYEKILERIKGYGQEII 222
           ++  R  G HG+ M    S T V G P+       RLP  E   +E +  R+   G+ II
Sbjct: 171 IQNCRTYGGHGEQMAVFASTTKVKGEPLTDFIGTTRLPLTE---WEALKVRVIQGGKHII 227

Query: 223 NLKNGSEY-GPASAIVNIVRCIAHDEKRLLTLSTYIEDEIEGIEGGCCIGVPVKVGKNGI 281
           +L+  S +  PA   + ++      +       TY+ +   G      + +   + K+G+
Sbjct: 228 DLRGRSSFQSPAYLSIEMIAAAMGGQPFRWPAGTYVSN---GKFDHIMMAMETSITKDGV 284

Query: 282 --EEVIHIKMEDDEIEGFKKSFE 302
             +EV     E +E+E   KS+E
Sbjct: 285 TYKEVAGSPSEQEELE---KSYE 304