Pairwise Alignments

Query, 241 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 221 a.a., ABC transporter ATP-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  210 bits (535), Expect = 2e-59
 Identities = 109/217 (50%), Positives = 145/217 (66%), Gaps = 1/217 (0%)

Query: 3   LIEAKNVIKTYGVGEAKSNVLKGVNLKIEEGEFVMIMGPSGCGKSTLMNVLGLLDVPSKG 62
           +I   ++ K Y   E ++  L+ VNL ++ GEF+ IMGPSGCGKSTL+N++GLLD P+ G
Sbjct: 1   MITLTSLSKIYRTDEIETVALENVNLTVDRGEFLSIMGPSGCGKSTLLNIMGLLDAPTTG 60

Query: 63  DVYIKGKKTTKMNENERAVFRRKISGFIFQQFHLIGTLTALGNVELPMTLDGKEETFRQK 122
            V I G  T  M + + A FR K  GF+FQ FHLI +L  + NVELP+         R++
Sbjct: 61  TVEINGTHTEGMKDKQLAAFRNKTLGFVFQSFHLINSLNVMDNVELPLLYRRIGSGERKR 120

Query: 123 RAKELLNIVGLSERENYKPSQLSGGQQQRVAIARSLSNNPKLLFADEPTGNLDSKSGKQV 182
            AKE+L  VGLS R N+ P+QLSGGQ QRV IAR++  +P+++ ADEPTGNLDSK G +V
Sbjct: 121 LAKEVLEKVGLSHRMNHFPTQLSGGQCQRVTIARAIIGHPEIILADEPTGNLDSKMGAEV 180

Query: 183 MEILENLHNE-GMTIVMVTHDSYMIKYATKVIRMKDG 218
           ME+L  L+ E G TIVMVTH+    K  ++ IR  DG
Sbjct: 181 MELLHRLNKEDGRTIVMVTHNEEQAKQTSRTIRFFDG 217