Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 656 a.a., Pyoverdine efflux carrier and ATP binding protein from Pseudomonas fluorescens FW300-N2E2

 Score =  136 bits (343), Expect = 2e-36
 Identities = 104/404 (25%), Positives = 193/404 (47%), Gaps = 25/404 (6%)

Query: 5   DVVSFAGRNITQKKTQSLLTIIGIVIGILAIVSLISLGYGVQNYITEEISKAGASVITVY 64
           D V  A R +   + ++ LT++GI+IG+ ++V ++++G G +  +  ++   G+++I  Y
Sbjct: 267 DAVQAAWRVMWINRFRTALTLLGIIIGVASVVVMLAVGEGSKRQVMAQMGAFGSNII--Y 324

Query: 65  PSQQITSIAMSKNF-NDRDLKAVEDVRGVDVVLYGWFGGTQVTYHDQEYYSSVFATKSST 123
            +    S   +K   ++ DL A+  +  V  ++        V + + ++ S V    ++ 
Sbjct: 325 LNGSAPSPRAAKGIISEYDLAALAALPEVQRIMPVNGADASVRFGNLDHTSYVGGNDTN- 383

Query: 124 YQIFFTEAYGYELEKGRWMKDSDKYTC----VIGYSLAHDTFDREID-IGDKIEINDKKY 178
               F   + + + +G +  ++D+ +     VIGY +    F    D +G  I I +  +
Sbjct: 384 ----FPIIFNWPVAQGSYFSEADERSAAAVAVIGYRVRQKLFKDVADPVGRYILIENMPF 439

Query: 179 KVVGILEQ----IGNPDDDNSIVIPYEAASEVFDVDDEYNMFMVKIKDGEDVTKVSEDIE 234
           +VVG+L +     G+ D D+ + +PY AAS            ++  KD   V +  + + 
Sbjct: 440 QVVGVLAEKGASSGDSDADDRVAVPYSAASVRLFGSRHPEYVVIAAKDAGKVKEAEQAVS 499

Query: 235 DELEDSR-GDENFSVLTAEQLAESISSIFSVLTIFLVGVAGISLLVGAVGISNTMHMSIL 293
             L     G ++F +     + ++ +     L++ L  +A ISLLVG +G+ N M M++ 
Sbjct: 500 RTLLRLHDGKKDFELTNNAAMIQAEARTQGTLSLMLGAIAAISLLVGGIGVMNIMLMTVR 559

Query: 294 ERRKDIGILKALGAENNTILSIFVVEAGFLGLFGGIVGTILGILIAKAIEYVAAISGYGL 353
           ER ++IGI  A GA    IL  F+ EA  L + GG+ G  L +L+  A+         G 
Sbjct: 560 ERTREIGIRMATGARQRDILRQFLTEAVMLSVVGGLAGIGLALLVGGALL-------LGK 612

Query: 354 IRAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE 397
           I     W  + G    + V G++ G+ PAR  A+L+PV  L  E
Sbjct: 613 IAVAFEWLAVFGAFGCALVTGVVFGFMPARKAARLDPVAALTSE 656