Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 415 a.a., lipoprotein releasing system, transmembrane protein, LolC/E family from Pseudomonas stutzeri RCH2

 Score = 65.1 bits (157), Expect = 4e-15
 Identities = 89/431 (20%), Positives = 182/431 (42%), Gaps = 66/431 (15%)

Query: 9   FAGRNITQKKTQ-------SLLTIIGIVIGILAIVSLISLGYGVQNYITEEI--SKAGAS 59
           F G   T+ K +       SL ++IG+ +G+LA++ ++S+  G Q  ++  I      A+
Sbjct: 9   FIGSRYTRAKRRNHFISFISLTSLIGLALGVLAMIMVLSVMNGFQREMSARILGMVPHAT 68

Query: 60  VITVYPSQQITSIA--MSKNFNDRDLKAVEDVRGVDVVLYGWFGGTQVTYHDQEYYSSVF 117
           VI   P     ++A  +S +     +  V  + G+ +   G     Q++  D +  + V 
Sbjct: 69  VIGDQPLDDWQAVAARLSAHSQIVGMAPVTQLEGM-LSFKGSMQPIQISGIDPQAEAQV- 126

Query: 118 ATKSSTYQIFFTEAYGYELEKGRWMKDSDKYTCVIGYSLAHDTFDREIDIGDKIEI---- 173
                   I      G  L++ +      ++  +IG           + +GDK+ +    
Sbjct: 127 -------SILGERLVGGSLDQLK----PGEFGVIIGLMTVRRF---GLKLGDKLTLIVPE 172

Query: 174 ----------NDKKYKVVGILEQIGNPDDDNSIVIPYEAASEVFDVDDEYNMFMVKIKDG 223
                       ++  VVG+ +   + D    ++   +AA       ++     +K+ D 
Sbjct: 173 VSSTPGGVTPRMQRLNVVGVFKVGADLDGSLGMIHRADAAQIHRWAPEQVQGVRLKLSDL 232

Query: 224 EDVTKVSEDIEDELEDSRGDENFSVLTAEQLAESISSIFSVLTIFLVGVAGISLLVGAVG 283
               +V+  +   L D    E++S            S+FS + +    +  + +L+ AV 
Sbjct: 233 YRAPEVAAQVGATLGDGYRVEDWSYTQG--------SLFSAMKMEKTMIGLLLMLIVAVA 284

Query: 284 ISN---TMHMSILERRKDIGILKALGAENNTILSIFVVEAGFLGLFGGIVGTILGIL--- 337
             N   T+ M + ++R DI IL+ LGA    I++IF+V+   +G  G ++G +LG+L   
Sbjct: 285 AFNIIATLIMVVADKRADIAILRTLGATPRQIMAIFMVQGSIIGFSGTVIGVVLGVLGAL 344

Query: 338 -IAKAIEYVAAISGYGLIRAWISW----------ELIVGVLVFSFVVGILSGYFPARSGA 386
            +++ + ++  +SG  +  + + +          E +V V V +  +  L+  +PA   A
Sbjct: 345 NVSELVNWLEKVSGQHIFSSDVYFISTLPSELRLEDVVLVSVAALSLSFLATLYPAWRAA 404

Query: 387 KLNPVDTLRGE 397
           +  P + LR E
Sbjct: 405 QTQPAEALRYE 415