Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 414 a.a., lipoprotein-releasing system transmembrane subunit LolE from Vibrio cholerae E7946 ATCC 55056

 Score = 77.8 bits (190), Expect = 5e-19
 Identities = 59/246 (23%), Positives = 122/246 (49%), Gaps = 29/246 (11%)

Query: 168 GDKIEINDK-KYKVVGILEQIGNPDDDNSIVIPYEAASEVFDVDDEYNMFMVKIKDGEDV 226
           GDK++   + + KV G+L   G  D   ++ +P E A     +        VK+ D    
Sbjct: 176 GDKVQAPKRVRVKVSGLLALNGQIDHSLAL-LPLEDAQAYAHLGSGVTGISVKVADVLQA 234

Query: 227 TKVSEDIEDELED----SRGDENFSVLTAEQLAESISSIFSVLTIFLVGVAGISLLVGAV 282
           T++  D+ ++L +        + +  L  +   + + +I  ++ + ++GVA  +++    
Sbjct: 235 TQIVRDVGNQLNEYVYLHSWQQKYGFLYRD--IQLVRTIMYLVMVLVIGVASFNIV---- 288

Query: 283 GISNTMHMSILERRKDIGILKALGAENNTILSIFVVEAGFLGLFGGIVGTILGILIA--- 339
              +T+ M++ +R  +I IL+ +GA +  I  IFV +  F G+ G +VG++LG+++A   
Sbjct: 289 ---STLMMAVKDRAGEIAILRTMGATDGLIKRIFVWQGVFSGVLGSVVGSVLGMVVAFNL 345

Query: 340 ----KAIEYVAA---ISG----YGLIRAWISWELIVGVLVFSFVVGILSGYFPARSGAKL 388
               K +E++     +SG       + + + W  +V V   + V+ +L+ ++PAR  ++L
Sbjct: 346 TPLIKGLEHLIGHQFLSGDIYFVDFLPSQVEWADVVLVSGTAIVLSLLATWYPARRASRL 405

Query: 389 NPVDTL 394
           NP   L
Sbjct: 406 NPAQVL 411