Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 404 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score = 73.9 bits (180), Expect = 8e-18
 Identities = 60/248 (24%), Positives = 115/248 (46%), Gaps = 18/248 (7%)

Query: 158 HDTFDREIDIGDKIEINDKKYKVVGILEQIGNP---DDDNSIVIPYEAASEVFDVDDEYN 214
           H     ++ IGD+ +I    ++V+GI++   +     D+  + IP     +++D     N
Sbjct: 160 HVAATSQLKIGDEFKIRGIAFRVIGIMDDESSRFSFGDNQKVFIPSSTFKDIWDTQP--N 217

Query: 215 MFMVKIKDGEDVTKVSEDIEDELEDSR--GDENFSVLTAEQLAESISSIFSVLT---IFL 269
           M +V    G     + E +            E+   +        ++ I ++L     FL
Sbjct: 218 MMLVLPAQGVSSWALREQLRHTFAQRLHFSPEDQEAVFLPDFGSGVAVITAILRGIQAFL 277

Query: 270 VGVAGISLLVGAVGISNTMHMSILERRKDIGILKALGAENNTILSIFVVEAGFLGLFGGI 329
                +++ VG +G++N M +++ ER ++IG+  A+GA    I   F++E   L + G +
Sbjct: 278 AASGMMTMAVGILGVANMMFLAVTERTREIGVRLAIGATPQRIQQQFLLEGLLLVVIGAL 337

Query: 330 VGTIL---GILIAKAIEYVAAISGYGLIRAWISWELIVGVLVFSFVVGILSGYFPARSGA 386
           VG +L   G+L+   +     + G  +I +   W   + +LV S ++ + + YFPAR  A
Sbjct: 338 VGLLLAYFGVLLLNHLGLPTWL-GEPVITSTTVW---LSMLVTS-ILALAAAYFPARRAA 392

Query: 387 KLNPVDTL 394
           +L PV  L
Sbjct: 393 QLEPVIAL 400