Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 657 a.a., ABC transporter:Protein of unknown function DUF214 from Pseudomonas syringae pv. syringae B728a

 Score =  143 bits (361), Expect = 1e-38
 Identities = 105/406 (25%), Positives = 203/406 (50%), Gaps = 29/406 (7%)

Query: 5   DVVSFAGRNITQKKTQSLLTIIGIVIGILAIVSLISLGYGVQNYITEEISKAGASVITVY 64
           D +  A R +   + ++ LT++GIVIG+ ++V ++++G G +  +  ++S  G+++I  Y
Sbjct: 268 DAIRAAWRVMWINRFRTALTLLGIVIGVASVVVMLAVGEGSKRQVMAQMSSFGSNII--Y 325

Query: 65  PSQQITSIAMSKN-FNDRDLKAVEDVRGVDVVLYGWFGGTQVTYHDQEYYSSVFATKSST 123
            + +  +    K      ++ A+ ++  V +++    G   V Y + ++ S V    +  
Sbjct: 326 LNGKAPNPRAPKGVITLEEVAALGELPEVKMIMPVNGGQAGVRYGNLDHSSYVGGNDTH- 384

Query: 124 YQIFFTEAYGYELEKGRWMKDSDKYTC----VIGYSLAHDTFDREID-IGDKIEINDKKY 178
               F   + + + +G +  ++D+       VIGY +    F  + D +G  I I +  +
Sbjct: 385 ----FPAIFNWPVVEGSYFSEADEQNAAAVAVIGYKVRQKLFGEQSDPVGQYILIENVPF 440

Query: 179 KVVGILEQ----IGNPDDDNSIVIPYEAAS-EVFDVDD-EYNMFMVKIKDGEDVTKVSED 232
           +VVG+L++     G+ D DN I IPY +AS  +F   D EY    +  +D  +V +  + 
Sbjct: 441 QVVGVLQEKGATSGDLDSDNRIAIPYSSASIRLFGTQDPEY--ITIATRDANNVKQAEQS 498

Query: 233 IEDELED-SRGDENFSVLTAEQLAESISSIFSVLTIFLVGVAGISLLVGAVGISNTMHMS 291
           I + L+    G +++ +     + ++ +   + L++ L  +A ISLLVG +G+ N M M+
Sbjct: 499 IRNLLQQLHHGKQDYELTNNAAMIQAEARTQNTLSLMLGSIAAISLLVGGIGVMNIMLMT 558

Query: 292 ILERRKDIGILKALGAENNTILSIFVVEAGFLGLFGGIVGTILGILIAKAIEYVAAISGY 351
           + ER ++IGI  A GA  + IL  F+ EA  L + GG+ G +L + +  A+        +
Sbjct: 559 VRERTREIGIRMATGARQSDILRQFLTEAVMLSVVGGLAGIVLALGMGAALLLSKVAVAF 618

Query: 352 GLIRAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE 397
            L         + G    + + G++ G+ PAR  A+L+PV  L  E
Sbjct: 619 TL-------PAVAGAFACALITGVIFGFMPARKAARLDPVAALTSE 657