Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 417 a.a., ABC transporter permease protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  135 bits (341), Expect = 2e-36
 Identities = 103/404 (25%), Positives = 196/404 (48%), Gaps = 38/404 (9%)

Query: 18  KTQSLLTIIGIVIGILAIVSLISLGYGVQNYITEEISKAGAS--VITVYPSQQITSIAMS 75
           K ++ LT++G++ G+ A+++++S+G G +    + I   G    V+   PS+      + 
Sbjct: 24  KLRTALTLLGMIFGVGAVIAMLSVGEGAEREALKMIESMGIKNLVVNARPSEGEALKTVR 83

Query: 76  KNFNDRDLKAVEDVRGVDVVLYGWFGGTQVTYHDQEYYSSVFATKSSTYQIF------FT 129
           ++     L+ +E        +  +  G QV          +F+ +  +  +       + 
Sbjct: 84  EHSIGLSLRDIESAMETLPFIEAYSAGKQVKVF------GLFSVQGRSDALVQGVTPSYF 137

Query: 130 EAYGYELEKGRWMKDSD----KYTCVIGYSLAHDTFDREIDIGDKIEINDKKYKVVGILE 185
           +    +L +GR + D D    +   V+G   A   F R   +G +I+IN + + VVG+L+
Sbjct: 138 DLSALKLAEGRLLGDEDEQHFRQLAVLGPEAARSLFPRGDAVGQRIKINHQWFTVVGVLD 197

Query: 186 Q----------IGNPDDDNSIVIPYEAASEVFD---VDDEYNMFMVKIKDGEDVTKVSED 232
           +          +    + N + IP   A +      ++DE +     +K+G D +  ++ 
Sbjct: 198 EGEKGKSAIEGVKVGGERNQVFIPLATALKKMQFKPLEDELDTIKFALKEGIDPSLAAKS 257

Query: 233 IEDELEDSRGDE-NFSVLTAEQLAESISSIFSVLTIFLVGVAGISLLVGAVGISNTMHMS 291
           +E  L    G+E ++ ++    L         +  I +  VAGISLLVG +GI N M  +
Sbjct: 258 VEHLLSRRHGNEQDYDIVVPADLLAQHQRTQQIFNIVMACVAGISLLVGGIGIMNIMLAT 317

Query: 292 ILERRKDIGILKALGAENNTILSIFVVEAGFLGLFGGIVGTILGILIAKAIEYVAAISGY 351
           ILER  +IG+L+ALGA    I   F++E+  +   GG++G  +G+L+A  I   +A +G+
Sbjct: 318 ILERTSEIGLLRALGATQKDIARQFLIESMVISATGGLIGIGVGLLLALVI---SAAAGW 374

Query: 352 GLIRAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLR 395
            +  AW  + +++ +LV    VGI  G +PA+  A+L+P+  L+
Sbjct: 375 PV--AWSVFAILLSLLV-CMAVGIGFGLYPAKKAARLDPIVALQ 415