Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 417 a.a., Lipoprotein releasing system, transmembrane protein, LolC/E family (NCBI) from Rhodospirillum rubrum S1H

 Score = 67.4 bits (163), Expect = 7e-16
 Identities = 68/267 (25%), Positives = 121/267 (45%), Gaps = 47/267 (17%)

Query: 167 IGDKIEINDKKYKV-------------VGILEQIGNPDDDNSIV-IPYEAASEVFDVDDE 212
           +GDK+ +   K KV             V ++  IG  + D+S V +P EAA   F V  E
Sbjct: 162 VGDKLTLVSPKGKVTAMGTVPRVRAYTVRVIFSIGMSEYDSSFVFLPLEAAQTYFQVPTE 221

Query: 213 -YNMFMVKIKDGEDVTKVSEDIED-------ELEDSRGDENFSVLTAEQLAESISSIFSV 264
             N   V +   + V +V+  I          L D R   N +   A Q+  ++  +F +
Sbjct: 222 GVNHLEVVVDHPDRVGEVAGTIASTNGLGGIRLRDWR-QTNATFFNALQVERNV--MFLI 278

Query: 265 LTIFLVGVAGISLLVGAVGISNTMHMSILERRKDIGILKALGAENNTILSIFVVEAGFLG 324
           LT+ +V VA  +++ G +       M + ++ +DI IL+ +GA    I+ IF +    +G
Sbjct: 279 LTLIIV-VAAFNIISGLI-------MLVKDKGRDIAILRTMGASRGAIMRIFFLAGAAVG 330

Query: 325 LFGGIVGTILGILIAKAIEYV----AAISGYGLIRAWISW----------ELIVGVLVFS 370
           + G + G +LG+L  + IE +     ++ G  L  A I +            ++ V++ +
Sbjct: 331 VTGTLAGLLLGVLFCQNIEAIRQGLQSLLGVELFNAEIYFLATMPATMDPHEVMNVVLMA 390

Query: 371 FVVGILSGYFPARSGAKLNPVDTLRGE 397
             +   +  +PA   A+ +PV+ LR E
Sbjct: 391 LGLSFAATLYPAWRAARTDPVEALRNE 417