Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 430 a.a., lipoprotein-releasing system transmembrane protein LolC from Phaeobacter inhibens DSM 17395

 Score = 62.4 bits (150), Expect = 2e-14
 Identities = 55/242 (22%), Positives = 108/242 (44%), Gaps = 32/242 (13%)

Query: 178 YKVVGILEQIGNPDDDNSIVIPYEAASEVFDVDDEYNMFMVKIKDGEDVTKVSEDI---E 234
           Y+VV I        D   + +P+  A   F+ +   +   V ++D E V ++   +    
Sbjct: 199 YEVVYIFTAGRYDIDRTRLYMPFAEAQSYFNREGYADEIEVMVEDPETVDRMVLPLLQAG 258

Query: 235 DELEDSRG-----DENFSVLTAEQLAESISSIFSVLTIFLVGVAGISLLVGAVGISNTMH 289
           D++    G     D +   L A ++ +++  +F +L+I +        L+  + I + + 
Sbjct: 259 DQVTSGIGVWTWRDASGGFLRALEVEDNV--MFIILSILV--------LIATMNIVSGLI 308

Query: 290 MSILERRKDIGILKALGAENNTILSIFVVEAGFLGLFGGIVGTILGILIAKAIEYV---- 345
           M +  + +DIGIL+ +G    +++ +F +     G+ G ++G ILG L A  I+ +    
Sbjct: 309 MLVKNKGRDIGILRTIGLSEGSVMRVFFLCGACTGVVGTLLGVILGCLFAIYIDPIFSFV 368

Query: 346 ----------AAISGYGLIRAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLR 395
                      AI G   + A +    ++  +  S  +  +   FPAR  A++NPV+ LR
Sbjct: 369 NYVMGGGVWDPAIRGIYALPAELRLADVLSAVALSLTLSFVITIFPARRAARMNPVEALR 428

Query: 396 GE 397
            E
Sbjct: 429 YE 430