Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 414 a.a., ABC transporter from Pedobacter sp. GW460-11-11-14-LB5

 Score =  130 bits (327), Expect = 7e-35
 Identities = 106/416 (25%), Positives = 204/416 (49%), Gaps = 44/416 (10%)

Query: 9   FAGRNITQKKTQSLLTIIGIVIGILAIVSLISLGYGVQNYITEEISKAGASVITV--YPS 66
           FA   + Q K +++L+++ I IGI  I+++ S     +  +   + K G++ I +  +P 
Sbjct: 13  FAFDALRQNKLRTMLSLLAITIGIFTIIAVFSAVDTFRGKLQASVDKLGSNTIYIQKWPW 72

Query: 67  QQITSIAMSKNFND-----RDLKA----VEDVRGVDVVLYGWFGGTQVTYHDQEYYS-SV 116
               +    K  N      RD +A    +E  +GV   +        + Y        SV
Sbjct: 73  SFGDNYPWWKYMNRPQPSLRDFEALRERIEHAQGVTFEIST--NDRTIKYRSNSVEGISV 130

Query: 117 FATKSSTYQIFFTEAYGYELEKGRWMKDSDKYT----CVIGYSLAHDTFDREIDIGDKIE 172
           +A         F + + +EL+ GR+  +++       C++G  +A   FD +  +G +++
Sbjct: 131 WAASHD-----FNKTWNFELQDGRYFTENESKNGTPVCILGSDIADGLFDGDAPVGKQVQ 185

Query: 173 INDKKYKVVGILEQIGNP----DDDNSIVIPYEAASEVFDVDDEYNMFMVKIKDGEDVTK 228
           I  ++  VVG+ ++ G        D ++ IP   A  V D+ +E     + ++  ++V+ 
Sbjct: 186 ILGRRLTVVGVFKKEGEDMLGTSLDKNVNIPIAFAKGVLDIQNERYGPQITVRGKDNVSL 245

Query: 229 VSEDIEDELEDSRG---------DENFSVLTAEQLAESISSIFSVLTIFLVGVAGISLLV 279
             E++E EL+             +E+F++     ++  + S+F ++ I    + G S+LV
Sbjct: 246 --EEVESELKGLMRSIHRIRPGQEEDFALNKTTIISNQLDSMFKMVNIAGWVIGGFSILV 303

Query: 280 GAVGISNTMHMSILERRKDIGILKALGAENNTILSIFVVEAGFLGLFGGIVGTILGILIA 339
           G   I+N M +S+ ER   IGI K+LGA+N  IL  F+ E+  L + GG++G +L  L+A
Sbjct: 304 GGFSIANIMFVSVKERTNIIGIQKSLGAKNYFILLQFIFESISLCILGGLLGLLLVFLLA 363

Query: 340 KAIEYVAAISGYGLIRAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLR 395
             I    A + + +I    +  L +G+   S ++G +SG++PA S ++L+PV+ +R
Sbjct: 364 LGI---GAATDFHIILGLNNIALGIGI---SIIIGTISGFWPAYSASRLDPVEAIR 413