Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 406 a.a., ABC-type antimicrobial peptide transport system, permease component from Dechlorosoma suillum PS

 Score =  137 bits (344), Expect = 7e-37
 Identities = 104/407 (25%), Positives = 188/407 (46%), Gaps = 32/407 (7%)

Query: 10  AGRNITQKKTQSLLTIIGIVIGILAIVSLISLGYGVQNYITEEISKAGASVITVYPSQQI 69
           A R +   + ++ LT++G+VIG+ A+V ++++G G Q  + + I+  G+++  V      
Sbjct: 9   AWRAMGANRLRTFLTMLGMVIGVGAVVLMLAIGQGAQYAVAQSINSMGSNLFIVLSGFTN 68

Query: 70  TSIAMSKNFND-----RDLKAVEDVRGVDVVLYGWFGGTQVTYHDQEYYSSVFATKSSTY 124
                S + N       D +A+ ++ GV+       G  Q+ Y    + S V  T  +  
Sbjct: 69  AGGVRSGSGNAPTLTVTDAEAITELDGVETAAPVHQGSAQLVYGSSNWNSYVIGTTPA-- 126

Query: 125 QIFFTEAYGYELEKGRWMKDSD----KYTCVIGYSLAHDTFDREIDIGDKIEINDKKYKV 180
              + +   + L  G    DSD        +IG + A + F  E   G  + I    + +
Sbjct: 127 ---YLDVRSWALVDGSPFTDSDLRASTRVALIGKTAAQNLFGAENPTGKTLRIGQAPFLI 183

Query: 181 VGIL----EQIGNPDDDNSIVIPYEAASEVF---DVDDEYNMFMVKIKDGEDVTKVSEDI 233
           +G+L    + +   D D+ +++P   A                MVK    E +  V   +
Sbjct: 184 LGVLAPKGQSLDGRDQDDVLIVPLTTAQRKLFGTPFQGSVRAIMVKAAAPEVMPAVENSM 243

Query: 234 EDELEDSRG-----DENFSVLTAEQLAESISSIFSVLTIFLVGVAGISLLVGAVGISNTM 288
              L          D++F+V     +A+S +    ++++ L  +A +SLLVG +GI N M
Sbjct: 244 NALLRQRHRIRPGQDDDFNVRNLTAVADSAAETTRIMSLLLGAIASVSLLVGGIGIMNIM 303

Query: 289 HMSILERRKDIGILKALGAENNTILSIFVVEAGFLGLFGGIVGTILGILIAKAIEYVAAI 348
            +S+ ER ++IGI  A+GA    IL+ F++EA  + + G ++G +LGI           +
Sbjct: 304 LVSVTERTREIGIRMAIGAREKDILTQFLLEAIVISIAGCLIGLLLGI---GGAVLTNLL 360

Query: 349 SGYGLIRAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLR 395
           +G  +I   IS   ++     +  VGI  GY+PAR  A+L+P++ LR
Sbjct: 361 TGTAVI---ISGSSVIVAFSVAAGVGIFFGYYPARKAARLDPIEALR 404