Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 407 a.a., ABC transporter permease from Methanococcus maripaludis JJ

 Score =  226 bits (576), Expect = 9e-64
 Identities = 138/418 (33%), Positives = 230/418 (55%), Gaps = 32/418 (7%)

Query: 1   MKPKDVVSFAGRNITQKKTQSLLTIIGIVIGILAIVSLISLGYGVQNYITEEISKAGASV 60
           MKP  +   A   +   K +S +TIIG+V+ + +++++IS G  ++  +T E+ K G  V
Sbjct: 1   MKPSKIFKLAFNMVKGSKLRSWITIIGVVVAVASVITIISAGELMEKQVTHELEKLGGDV 60

Query: 61  ITVYPSQQITSIAMSKNFNDRDLKAVEDVRGVDVVLYGWFGGTQVTYHDQEYYSSVFATK 120
           I+VY     TS + +      D+  ++ +  V  V       ++++Y D+E YS +    
Sbjct: 61  ISVYAITTETS-SKTPELTKTDVLVIKGIPSVKYVDKRVTSYSKISYGDKELYSQITGVD 119

Query: 121 SSTYQIFFTEAYGYELEKGRWMKDSDKYTCVIGYSLAHDTFDREIDIGDKIEINDKKYKV 180
            + +     E    ++E GR ++  DK   VI   LA++ F+R+I+I   I+I +K ++V
Sbjct: 120 PAVWPKITQE----KVETGRMLQPGDKNVVVINNYLANEEFNRKININQIIKIGNKSFRV 175

Query: 181 VGILEQIGNPDDDNSIVIP------YEAASEVFDVDDE-----------YNMFMVKIKDG 223
           +GIL      D+D+S +        Y     V+D++ +           Y+   +K+K+ 
Sbjct: 176 IGIL------DNDSSGLASLFSGGIYAPLDSVYDIEQDSDYSVPKERGTYDSLEIKLKEN 229

Query: 224 EDVTKVSEDIEDELEDSRG----DENFSVLTAEQLAESISSIFSVLTIFLVGVAGISLLV 279
            D     +DIE +L  SR     +++F + +A+   ES  SI   +T+FL  +AGISL+V
Sbjct: 230 VDTDAAVQDIEQKLRTSRHVTEKNQDFYISSAKSFIESSQSIIGGITLFLSFIAGISLIV 289

Query: 280 GAVGISNTMHMSILERRKDIGILKALGAENNTILSIFVVEAGFLGLFGGIVGTILGILIA 339
           GA GISNTM  ++LE+ K+IGI+KA+GA+N  IL +F+  +G +GL GG +G ++G+LI 
Sbjct: 290 GAFGISNTMFTAVLEKTKEIGIMKAIGAKNEDILLLFLFNSGLIGLAGGFLGLLIGVLIT 349

Query: 340 KAIEYVAAISGYGLIRAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE 397
           + I YV A+        ++S + +V  LV S   GIL+G  PA + +KL PVD LR E
Sbjct: 350 QVITYVIALKFGTPFEFYVSIKSVVVALVVSIGAGILAGAVPAYNASKLKPVDALRSE 407