Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 397 a.a., ABC transporter permease from Methanococcus maripaludis JJ

 Score =  595 bits (1534), Expect = e-175
 Identities = 299/397 (75%), Positives = 346/397 (87%)

Query: 1   MKPKDVVSFAGRNITQKKTQSLLTIIGIVIGILAIVSLISLGYGVQNYITEEISKAGASV 60
           M+  DVVSFAGRNITQKKTQS LTIIG+VIGILAIVSLISLG+GVQNYIT EI+  GA+V
Sbjct: 1   MRLTDVVSFAGRNITQKKTQSFLTIIGVVIGILAIVSLISLGFGVQNYITGEITTIGANV 60

Query: 61  ITVYPSQQITSIAMSKNFNDRDLKAVEDVRGVDVVLYGWFGGTQVTYHDQEYYSSVFATK 120
           I++ PSQ     A+SKNFND D+ AV +VRGV+ V+  WFG   + Y DQ +Y +V   +
Sbjct: 61  ISILPSQNFGGPAVSKNFNDNDVSAVRNVRGVEEVVAAWFGSYGLEYRDQTHYGNVLVIE 120

Query: 121 SSTYQIFFTEAYGYELEKGRWMKDSDKYTCVIGYSLAHDTFDREIDIGDKIEINDKKYKV 180
            S +   +++ +GYE  KGRW++D+DKY+C+IGY+LA ++FDREIDIGDKI INDKKYKV
Sbjct: 121 PSKFTHVYSKTWGYEPYKGRWIEDNDKYSCMIGYALATNSFDREIDIGDKITINDKKYKV 180

Query: 181 VGILEQIGNPDDDNSIVIPYEAASEVFDVDDEYNMFMVKIKDGEDVTKVSEDIEDELEDS 240
           +GILE+ GNP  ++S+++  +   E+F+++DEYNM +V ++ GEDV KVSEDIEDELEDS
Sbjct: 181 IGILEETGNPRTEDSVILSKDVGEELFEINDEYNMMIVSVRSGEDVNKVSEDIEDELEDS 240

Query: 241 RGDENFSVLTAEQLAESISSIFSVLTIFLVGVAGISLLVGAVGISNTMHMSILERRKDIG 300
           RGDENFSVLTAEQLAESI+SIF VLTIFLVGVAGISLLVGAVGISNTMHMSILERRKDIG
Sbjct: 241 RGDENFSVLTAEQLAESINSIFEVLTIFLVGVAGISLLVGAVGISNTMHMSILERRKDIG 300

Query: 301 ILKALGAENNTILSIFVVEAGFLGLFGGIVGTILGILIAKAIEYVAAISGYGLIRAWISW 360
           ILKALGAENNTILSIFVVEAGFLGLFGGI+GTILGILIAKAIEY+AAISGYGLIRAWISW
Sbjct: 301 ILKALGAENNTILSIFVVEAGFLGLFGGIIGTILGILIAKAIEYIAAISGYGLIRAWISW 360

Query: 361 ELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE 397
           ELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE
Sbjct: 361 ELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE 397