Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 647 a.a., macrolide ABC transporter permease/ATP-binding protein MacB from Klebsiella michiganensis M5al

 Score =  125 bits (315), Expect = 3e-33
 Identities = 102/398 (25%), Positives = 186/398 (46%), Gaps = 15/398 (3%)

Query: 7   VSFAGRNITQKKTQSLLTIIGIVIGILAIVSLISLGYGVQNYITEEISKAGASVITVYPS 66
           V  A R++   + ++ L+++GI+IGI ++VS +++G G +  I  EI K G + + + P 
Sbjct: 258 VRMAWRSLLGHRMRAFLSMLGIIIGISSVVSSMAVGEGARQSIMNEIGKLGNTTLEIRPG 317

Query: 67  QQITSIA--MSKNFNDRDLKAVED---VRGVDVVLYGWFGGTQVTYHDQEYYSSVFATKS 121
               S    M +  +  D+ ++     V+GV  ++       +  +      S V A   
Sbjct: 318 TGWGSKRPDMERALSLDDIASLGRQPWVQGVSPIVSSMTTAVRQGFDSSIILSGVSAEYF 377

Query: 122 STYQIFFTEAYGYELEKGRWMKDSDKYTCVIGYSLAHDTFDREIDIGDKIEINDKKYKVV 181
           S   + F +  G+     R ++D +    +   S        E  +G  ++I    ++V+
Sbjct: 378 SLQGMRFIQGNGFT---HRDVEDREPVLVLDETSRETLFPGNEDPLGKIVQIAGAPWRVI 434

Query: 182 GILEQIGNPDDDN--SIVIPYEAASEVFDVDDEYNMFMVKIKDGEDVTKVSEDIEDELED 239
           GI  + G        S  IPY +  +    D       ++ ++       +   E  L  
Sbjct: 435 GIASKPGPKVVSGFMSAWIPYTSLLQRISGDKPLEALTLRFQETLSPQDAARRAERHLIR 494

Query: 240 SRGDENFSVLTAEQLAESISSIFSVLTIFLVGVAGISLLVGAVGISNTMHMSILERRKDI 299
             G ++F V T EQLA+++      +++ +  +A ISLLVG VG+ N M +S+ ER  +I
Sbjct: 495 EHGKKDFFVQTDEQLAKALQKTSDSMSLLITAIAAISLLVGGVGVMNIMLVSVTERTHEI 554

Query: 300 GILKALGAENNTILSIFVVEAGFLGLFGGIVGTILGILIAKAIEYVAAISGYGLIRAWIS 359
           GI  ++GA  + I+  F++EA  +   GG+ G +LG   A  + +      + ++  W+ 
Sbjct: 555 GIRLSVGARPSDIMHQFLIEAVMICALGGLTG-VLGSWAAGNL-FALLTQEFSMVFTWLP 612

Query: 360 WELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE 397
             +  G   FS ++G+  GYFPAR  A+LNP + L  E
Sbjct: 613 VAMACG---FSALIGLTFGYFPARRAARLNPTEALARE 647