Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 406 a.a., ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 92.0 bits (227), Expect = 3e-23
 Identities = 95/408 (23%), Positives = 177/408 (43%), Gaps = 37/408 (9%)

Query: 12  RNITQKKTQSLLTIIGIVIGILAIVSLISLGYGVQNYITEEISKAGASVITVYPSQ---- 67
           +++   +T++LL ++G+ +G LA+ +++ +   +      E  K G +++     Q    
Sbjct: 9   KSLAAHRTRALLAMLGVFLGALALTAVMHVAGAMVLKADLETQKLGPNLLQALSGQVRFR 68

Query: 68  ---QITSIAMSKNFNDRDLKAVEDVRGVDVVLYG---WFGGTQVTYHDQEYYSSVFATKS 121
                    +++ F  +D +A+  + GV  V  G         V Y   +  S + AT  
Sbjct: 69  RDGPSGVSGVNRTFTLQDAEAI--LGGVAQVRDGVPYCNAPMPVRYGSIKTTSQLVATLP 126

Query: 122 STYQIFFTEAYGYELEKGRWMKDSDK----YTCVIGYSLAHDTFDREID-IGDKIEINDK 176
                 F     Y    GR++ D D+      CV+G ++A   F+R  + +G  +     
Sbjct: 127 G-----FARVRAYSPAYGRFISDEDEAGRALVCVLGTAIATRLFERPDNAVGRTVFFFRA 181

Query: 177 KYKVVGILEQIGNPDD----DNSIVIPYEAASEVFDVDDEYNMFMVKIKDGEDVTKVSED 232
             +VVG++E+ G        D  + +P           D  +   + + DG D       
Sbjct: 182 PVQVVGVMEEKGQDVSGTNLDEQVYVPLSTYMRRMANQDWISGVYMNLHDGADEEAARAA 241

Query: 233 IEDELEDSR-----GDENFSVLTAEQLAESISSIFSVLTIFLVGVAGISLLVGAVGISNT 287
           +   L           ++FSVL+A    +       ++    V  + IS  VG++GI + 
Sbjct: 242 VTAILRSRHLIAAGQKDDFSVLSARDANKLRKEALDLVQTLGVLSSSISFAVGSLGILSI 301

Query: 288 MHMSILERRKDIGILKALGAENNTILSIFVVEAGFLGLFGGIVGTILGILIAKAIEYVAA 347
           M + +  RR +IG+ +A+GA  N I+  F+ EA   GL  G+ GT LG+++A A+  V  
Sbjct: 302 MTLLVRARRLEIGVRRAVGASRNVIVRQFLAEA---GLMAGVGGT-LGVVVALAL--VTV 355

Query: 348 ISGYGLIRAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLR 395
           +   G         L  G  + S V+G+ +G +PA   ++++ +D LR
Sbjct: 356 VYAVGDFPYTYDPLLAAGACIASVVLGVAAGAYPAWQASRVDVLDVLR 403