Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 411 a.a., lipoprotein releasing system, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 65.5 bits (158), Expect = 3e-15
 Identities = 57/229 (24%), Positives = 112/229 (48%), Gaps = 11/229 (4%)

Query: 176 KKYKVVGILEQIGNPDDDNSI-VIPYEAASEVFDVDDEYNMFMVKIKDGEDVTKVSEDIE 234
           + ++V GI    G  + D+S+  +  +AA ++  + +     +  + D  DV K     E
Sbjct: 187 RPFRVAGIFTT-GMYEYDSSLGFVTLDAARDILGLPEGQVSGIEVVVD--DVYKADVIGE 243

Query: 235 DELEDSRGDENFSVLTAEQLAESISSIFSVLTIFLVGVAGISLLVGAVGISNTMHMSILE 294
           D L+ S G   +     E  A   +++    T   V +  + +LVG+  I  T+ M ++E
Sbjct: 244 DVLKASGGYPYYVRNWMEMNANLFAALKLEKTAMFV-ILALIVLVGSFSIVTTLVMLVME 302

Query: 295 RRKDIGILKALGAENNTILSIFVVEAGFLGLFGGIVGTILGILIAKAI---EYVAAISG- 350
           + +DI IL ++GA  + +  IF+++   +G  G  +G +LG+ ++ A+   +++    G 
Sbjct: 303 KTRDIAILMSMGATRSMVRRIFMLQGTIIGAIGTALGYVLGLSVSWALQRYQFIKLPQGV 362

Query: 351 YGL--IRAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE 397
           Y +  +   + W  +  V   + ++  L+  +PAR  A L PV+ LR E
Sbjct: 363 YSIDHLPVLLQWSDLAAVGGAAMLLCFLATIYPARQAAALEPVEALRYE 411