Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 428 a.a., lipoprotein releasing system, transmembrane protein, LolC/E family (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 62.8 bits (151), Expect = 2e-14
 Identities = 54/242 (22%), Positives = 108/242 (44%), Gaps = 31/242 (12%)

Query: 176 KKYKVVGILEQIGNPDDDNS-IVIPYEAASEVFDVDDEYNMFMVKIKDGEDVTKVSEDI- 233
           K Y+VV +   +G  D D + + +P+  A   F+ +   +   V + D E++ + +  + 
Sbjct: 198 KAYEVVYVFS-LGRFDIDRTRVYMPFAEAQAFFNREGGADEIEVMVADPENLDRYTLGLM 256

Query: 234 ----EDELEDSRGDENFSVLTAEQLAESISSIFSVLTIFLVGVAGISLLVGAVGISNTMH 289
               +  L  +  D +   L A ++ +++  I          +  I +L+ A+ I + + 
Sbjct: 257 QAAGQGALLWTWQDASGGFLRALEIEDNVMFI----------IMSILVLIAAMNIISGLV 306

Query: 290 MSILERRKDIGILKALGAENNTILSIFVVEAGFLGLFGGIVGTILGILIAKAIEYVAAIS 349
           M +  + +DIGIL+ +G     +L +F +     G+ G  +G +LG L A  I+ V +  
Sbjct: 307 MLVKNKGRDIGILRTMGLSEGAVLRVFFLCGAATGVIGTALGVVLGCLFAIYIDQVFSFV 366

Query: 350 GYGL--------------IRAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLR 395
            + L              + A + +  +   +  S  +  +   FPAR  A++NPV+ LR
Sbjct: 367 NWALGGGVWDPSIRGIYNVPAKLEFGDVASAVALSLGLSFVVTLFPARRAARMNPVEALR 426

Query: 396 GE 397
            E
Sbjct: 427 YE 428