Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 656 a.a., ABC transporter related (RefSeq) from Shewanella sp. ANA-3

 Score =  140 bits (353), Expect = 1e-37
 Identities = 108/395 (27%), Positives = 188/395 (47%), Gaps = 26/395 (6%)

Query: 18  KTQSLLTIIGIVIGILAIVSLISLGYGVQNYITEEISKAGASVITVYPSQQITS--IAMS 75
           + ++ LT++GI+IGI ++VS+++LG G Q  I + IS  G + I + P         A  
Sbjct: 273 RLRTFLTMLGIIIGIASVVSVVALGEGSQREILKSISSMGTNTIDIRPGSGFGDRRSARV 332

Query: 76  KNFNDRDLKAVEDVRGVDVVLYGWFGGTQVTYHDQEYYSSVFATKSSTYQIFFTEAYGYE 135
           +     D  A++++  VD V         V Y ++    +V AT +     FF    GYE
Sbjct: 333 RTLTASDANALKNLPYVDSVTPSIGSSATVRYGNK----AVTATVNGVGPEFF-RVRGYE 387

Query: 136 LEKGRWMKDSD----KYTCVIGYSLAHDTFDREID-----IGDKIEINDKKYKVVGILEQ 186
           L +G++  D          VI  +     F          IG+ I + D   +++G+ + 
Sbjct: 388 LAQGQFWDDDSVNALAQDAVIDENTRKQLFPNSSGAMNSAIGEVIFLGDLPVRIIGVTQP 447

Query: 187 ----IGNPDDDNSIVIPYEAASEVFDVDDEYNMFMVKIKDGEDVTKVSEDIEDELEDSRG 242
                GN D  N + +PY   S         +   V++ +        + I   L+   G
Sbjct: 448 KESAFGNSDALN-VWVPYTTVSGRMVGKKYLDGITVRLDESVPSNAAEQGIISLLKMRHG 506

Query: 243 DENFSVLTAEQLAESISSIFSVLTIFLVGVAGISLLVGAVGISNTMHMSILERRKDIGIL 302
            ++F  +  + + ++I    + +T+ +  +A ISL+VG +G+ N M +S+ ER ++IG+ 
Sbjct: 507 TQDFFTINTDTIRQNIEKTTATMTLLISAIAVISLVVGGIGVMNIMLVSVTERTREIGVR 566

Query: 303 KALGAENNTILSIFVVEAGFLGLFGGIVGTILGILIAKAIEYVAAISGYGLIRAWISWEL 362
            A+GA  + IL  F++EA  + L GG +G  L  LI   + +  A   + +I +  S   
Sbjct: 567 MAVGARQSDILRQFLIEAVLVCLCGGALGVALAYLI--GVVFAQAGGSFQMIYSTTS--- 621

Query: 363 IVGVLVFSFVVGILSGYFPARSGAKLNPVDTLRGE 397
           IV     S ++G+L G+ PAR+ A+L+PVD L  E
Sbjct: 622 IVAAFACSTLIGVLFGFLPARNAARLDPVDALARE 656