Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 399 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score = 79.0 bits (193), Expect = 2e-19
 Identities = 92/410 (22%), Positives = 178/410 (43%), Gaps = 49/410 (11%)

Query: 13  NITQKKTQSLLTIIGIVIGILAIVSLISLGYGVQNYITEEISKAGASVI--TVYPSQQIT 70
           ++ + K+  LL ++ I++ +  + +   +     N +  +       V   ++Y   + T
Sbjct: 10  SLLRSKSGPLLLLLQIILSVAIVANASFIIAERLNLMARDSGVVENEVFDFSIYHFDKST 69

Query: 71  SIAMSKNFNDRDLKAVEDVRGV-DVV------LYGWFGGTQVTYHDQEYYSSVFATKSST 123
            +      + RDL+ +  + GV DV       L G    +  T   +E   S   T    
Sbjct: 70  DLVAQ---DKRDLELLRAIPGVIDVAPTSMAPLSGGGWSSNFTLGPEERAKSTPNTGMYM 126

Query: 124 YQIFFTEAYGYELEKGR----------WMKDSDKYTCVIGYSLAHDTFDREIDIGDKIEI 173
               F  + G +L +GR           ++D  K   ++  + A   +  E  +G  + +
Sbjct: 127 SDEHFINSLGLKLVEGRNFYPQEITTELLEDGGKM--LVTKAFADKVWPNETALGKSVYM 184

Query: 174 NDKKYKVVGILEQIGNPDDDNSIVIPYEAASEVFDVDDEYNMFMVKIKDGEDVTKVSEDI 233
             + + V+G+LE++     DN  +      S  +  D  Y  ++V+ K   D+ ++ E I
Sbjct: 185 GTQHFVVIGVLERLQTAWVDNKNLEFSSVLSVNYPAD--YKRYLVRAKSS-DMARLKEVI 241

Query: 234 EDELED---SRGDENFSVLTAEQLA-----ESISSIFSVLTIFLVGVAGISLLVGAVGIS 285
            + L     SR  E F+ +   ++      E ++++ +++ + L       LL+ ++G++
Sbjct: 242 PELLHKEYPSRVVEGFTTMGERRIEAYRDHELMATVLTMMVVLL-------LLITSLGVT 294

Query: 286 NTMHMSILERRKDIGILKALGAENNTILSIFVVEAGFLGLFGGIVGTILGILIAKAIEYV 345
             +  +I  R K IG  +ALGA+   I+S F+VE   L L GG +G +L I + + +   
Sbjct: 295 GMVMFNIQRRTKQIGTRRALGAKKRDIISYFLVENYLLCLLGGSIGVLLAIQLGQQL--- 351

Query: 346 AAISGYGLIRAWISWELIVGVLVFSFVVGILSGYFPARSGAKLNPVDTLR 395
             +S Y L    I + L+   +   F V  L+ Y PAR  AK++P    R
Sbjct: 352 --MSLYSLPMLEIVYPLL--TVAGLFAVTTLAVYLPARKAAKISPATATR 397