Pairwise Alignments
Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2
Subject, 614 a.a., ATPase components of various ABC-type transport systems, contain duplicated ATPase from Pseudomonas fluorescens FW300-N2E2
Score = 134 bits (337), Expect = 1e-35
Identities = 126/523 (24%), Positives = 232/523 (44%), Gaps = 62/523 (11%)
Query: 15 DTEVLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEPTSGQIIYHVAYCPHCEN 74
+ E++K VSF L +G+V+ ++G SG+GK+ + L G C
Sbjct: 20 EVEIVKGVSFSLEKGEVLALIGESGSGKTTIALALLGYARRG---------------CRL 64
Query: 75 VEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQRTFALYGE-KTVAENIM 133
Q+G E + +A S E+ +++ + Q A + K + + ++
Sbjct: 65 AGGVVQIG-----EHDMLALS-----ERELQGLRGNRVSYIAQSAAAAFNPAKKLIDQVV 114
Query: 134 EALTAAGYEGKDATEW-ALNLIKMVKL---EHRVAHISRDLSGGEKQRVVLARQIAKNPV 189
E G + E A+ L + + L E +SGG+ QRV+ A + +P+
Sbjct: 115 EGAVIHGLGSRAVLEAKAIELFRDLALPDPERIGQRYPHQVSGGQLQRVMAAMALISDPL 174
Query: 190 IFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVIEELCQKAIWLDKGEM- 248
+ + DEPT LD T V A V + V SH V+ ++ + + L+ G++
Sbjct: 175 LVVLDEPTTALDVTTQIDVLRAFKRVVRERGATAVYVSHDLAVVAQMADQIVVLNGGQIF 234
Query: 249 -------RLVGESKHVVEEFMKTV---TSMKEFEKVEVKDELLKLENVEKRYVSVDRG-- 296
L G + + T+++ V LL ++ + Y + ++
Sbjct: 235 EQSATAPLLKGPAHAYTRSLLAAARPDTTIRPPCGVAEDTPLLTIQGLTAGYGNKNQQGM 294
Query: 297 -IVKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPSKGNYEFRLADEWVDMTK 355
++ ++ ID+++ + G++G SG+GK+TL++++A ++ P+ G F D
Sbjct: 295 PAIRVLEDIDLTVRRGQAIGVIGESGSGKSTLARVVAGLLTPALGGLTF-------DGQP 347
Query: 356 VGPLYRGRAK---RYIGMLFQ--EYSLYPHRTILYNLTESIGLE--MPGEFAKMKAEHTL 408
+G R R I M+FQ + +L P +I L+ + + + G + + L
Sbjct: 348 LGGSLSERTDEQFRRIQMVFQNADTALNPMHSISTILSRPLKMYFGLKGAALRERIGELL 407
Query: 409 VSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLILLDEPTGTMDPITRNQVA 468
V + M E+ PSELS G+K RV LA+ L +P LIL DE T +D + +
Sbjct: 408 DLVRLPRD----MAERRPSELSGGQKQRVNLARALAAKPDLILCDEVTSALDTVVGAAIL 463
Query: 469 ESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTG 511
E ++ R +L +Y+ +SHD+ V +CD ++ G ++ G
Sbjct: 464 ELLRDLRQQLGVSYLFISHDISTVRALCDDIVVMYSGHKVQAG 506
Score = 82.0 bits (201), Expect = 6e-20
Identities = 67/250 (26%), Positives = 123/250 (49%), Gaps = 18/250 (7%)
Query: 279 ELLKLENVEKRYVSV-DRGIVKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPP 337
+L+++EN+ R V+ +R V+ V G+ S+ + E+ L+G SG+GKTT++ +A +
Sbjct: 3 QLIRVENL--RVVACGERSEVEIVKGVSFSLEKGEVLALIGESGSGKTTIA--LALLGYA 58
Query: 338 SKGNYEFRLADEWVDMTKVGPL---------YRGRAKRYIGMLFQEYSLYPHRTILYNLT 388
+G RLA V + + L RG YI + P + ++ +
Sbjct: 59 RRG---CRLAGGVVQIGEHDMLALSERELQGLRGNRVSYIAQSAAA-AFNPAKKLIDQVV 114
Query: 389 ESIGLEMPGEFAKMKAEHTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPH 448
E + G A ++A+ + + E + +++P ++S G+ RV A LI +P
Sbjct: 115 EGAVIHGLGSRAVLEAKAIELFRDLALPDPERIGQRYPHQVSGGQLQRVMAAMALISDPL 174
Query: 449 LILLDEPTGTMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKII 508
L++LDEPT +D T+ V + ++ E T V VSHD+ V + D+ ++ GG+I
Sbjct: 175 LVVLDEPTTALDVTTQIDVLRAFKRVVRERGATAVYVSHDLAVVAQMADQIVVLNGGQIF 234
Query: 509 KTGKPDEIVK 518
+ ++K
Sbjct: 235 EQSATAPLLK 244
Score = 64.3 bits (155), Expect = 1e-14
Identities = 59/253 (23%), Positives = 101/253 (39%), Gaps = 37/253 (14%)
Query: 3 LLEVKNVSKSYGDTE--------VLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEG 54
LL ++ ++ YG+ VL+++ + G +GV+G SG+GKS L ++ G+
Sbjct: 276 LLTIQGLTAGYGNKNQQGMPAIRVLEDIDLTVRRGQAIGVIGESGSGKSTLARVVAGL-- 333
Query: 55 YEPTSGQIIYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAI 114
P G + + + G E E + + N + I+
Sbjct: 334 LTPALGGLTF-----------DGQPLGGSLSERTDEQFRRIQMVFQNADTALNPMHSIST 382
Query: 115 MLQRTFALYGEKTVAENIMEALTAAGYEGKDATEWALNLIKMVKLEHRVA-HISRDLSGG 173
+L R +Y G +G E L+ +V+L +A +LSGG
Sbjct: 383 ILSRPLKMY---------------FGLKGAALRERIGELLDLVRLPRDMAERRPSELSGG 427
Query: 174 EKQRVVLARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVI 233
+KQRV LAR +A P + L DE T LD + L + + ++ + SH +
Sbjct: 428 QKQRVNLARALAAKPDLILCDEVTSALDTVVGAAILELLRDLRQQLGVSYLFISHDISTV 487
Query: 234 EELCQKAIWLDKG 246
LC + + G
Sbjct: 488 RALCDDIVVMYSG 500