Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 372 a.a., glycine/betaine ABC transporter from Pseudomonas fluorescens FW300-N2C3

 Score =  135 bits (339), Expect = 3e-36
 Identities = 78/235 (33%), Positives = 133/235 (56%), Gaps = 9/235 (3%)

Query: 284 ENVEKRYVSVDRGIVKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPSKGNYE 343
           + + K  +  D   V  V  + + +   EIF ++G+SG+GK+TL +++  +I PS G   
Sbjct: 36  QGLTKTRILQDYSCVVGVSNVSLQVRRGEIFCIMGLSGSGKSTLIRLLNKLITPSSGKVL 95

Query: 344 FRLADEWVDMTKVGPLYRGRAKRYIGMLFQEYSLYPHRTILYNLTESIGLEMPGEFAKMK 403
            +  D  +       L   RA R+IGM+FQ  +L P+RT+L N    + ++  G+  + K
Sbjct: 96  VKGKD--LSTLSAAQLREVRA-RHIGMVFQSVALLPNRTVLENTAFGLEVQGIGKAERYK 152

Query: 404 -AEHTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLILLDEPTGTMDPI 462
            AE  L  VG +E       +++PSELS G + RV LA+ +  +P +IL+DEP   +DP+
Sbjct: 153 VAERALAKVGLSEWS-----QRYPSELSGGMQQRVGLARAITADPEVILMDEPFSALDPL 207

Query: 463 TRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTGKPDEIV 517
            R Q+ +  ++   EL ++ V ++HD+D  + + DR A+++ G II+ G  +EIV
Sbjct: 208 IRRQLQDEFRQLTKELGKSAVFITHDLDEAIRIGDRIAIMKDGVIIQVGTAEEIV 262



 Score = 63.2 bits (152), Expect = 2e-14
 Identities = 55/250 (22%), Positives = 103/250 (41%), Gaps = 30/250 (12%)

Query: 9   VSKSYGDTEVLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEPTSGQIIYHVAY 68
           + + Y     + NVS ++  G++  ++G SG+GKS L+ +L  +    P+SG+++     
Sbjct: 43  ILQDYSCVVGVSNVSLQVRRGEIFCIMGLSGSGKSTLIRLLNKL--ITPSSGKVLVK--- 97

Query: 69  CPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQRTFALYGEKTV 128
                                    K +   +  ++     + I ++ Q + AL   +TV
Sbjct: 98  ------------------------GKDLSTLSAAQLREVRARHIGMVFQ-SVALLPNRTV 132

Query: 129 AENIMEALTAAGYEGKDATEWALNLIKMVKLEHRVAHISRDLSGGEKQRVVLARQIAKNP 188
            EN    L   G    +  + A   +  V L         +LSGG +QRV LAR I  +P
Sbjct: 133 LENTAFGLEVQGIGKAERYKVAERALAKVGLSEWSQRYPSELSGGMQQRVGLARAITADP 192

Query: 189 VIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVIEELCQKAIWLDKGEM 248
            + L DEP   LDP   + + +   +   +   + V  +H  +    +  +   +  G +
Sbjct: 193 EVILMDEPFSALDPLIRRQLQDEFRQLTKELGKSAVFITHDLDEAIRIGDRIAIMKDGVI 252

Query: 249 RLVGESKHVV 258
             VG ++ +V
Sbjct: 253 IQVGTAEEIV 262