Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 367 a.a., Various polyols ABC transporter, ATP-binding component from Pseudomonas fluorescens FW300-N1B4

 Score =  127 bits (318), Expect = 9e-34
 Identities = 79/233 (33%), Positives = 125/233 (53%), Gaps = 18/233 (7%)

Query: 281 LKLENVEKRYVSVDRGIVKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPSKG 340
           LK++N++K +          + GID+ +N+KE    VG SG GK+TL ++IA +   S G
Sbjct: 4   LKIKNLQKGFEGFS-----IIKGIDLEVNDKEFVVFVGPSGCGKSTLLRLIAGLEEVSGG 58

Query: 341 NYEFRLADEWVDMTKVGPLYRGRAKRYIGMLFQEYSLYPHRTILYNLTESIGLEMPGEFA 400
             E     +  D+T+V P     AKR + M+FQ Y+LYPH ++  N+  S  L++ G  A
Sbjct: 59  TIEL----DGRDITEVSP-----AKRDLAMVFQTYALYPHMSVRKNM--SFALDLAG-VA 106

Query: 401 KMKAEHTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLILLDEPTGTMD 460
           K + E   V       E   MLE+ P +LS G++ RVA+ + ++R P + L DEP   +D
Sbjct: 107 KAEVEKK-VGEAARILELGPMLERKPKQLSGGQRQRVAIGRAIVRNPKIFLFDEPLSNLD 165

Query: 461 PITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTGKP 513
              R Q+   + +   EL  T + V+HD    + + D+  ++ GGKI + G P
Sbjct: 166 AALRVQMRLELLRLHKELQATMIYVTHDQVEAMTMADKVVVLNGGKIEQVGSP 218



 Score = 84.0 bits (206), Expect = 9e-21
 Identities = 65/252 (25%), Positives = 114/252 (45%), Gaps = 36/252 (14%)

Query: 1   MLLLEVKNVSKSYGDTEVLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEPTSG 60
           M  L++KN+ K +    ++K +  E+N+ + +  +G SG GKS LL ++ G+E  E + G
Sbjct: 1   MANLKIKNLQKGFEGFSIIKGIDLEVNDKEFVVFVGPSGCGKSTLLRLIAGLE--EVSGG 58

Query: 61  QIIYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQRTF 120
            I                                 +D  +  E++ A K+ +A++ Q T+
Sbjct: 59  TI--------------------------------ELDGRDITEVSPA-KRDLAMVFQ-TY 84

Query: 121 ALYGEKTVAENIMEALTAAGYEGKDATEWALNLIKMVKLEHRVAHISRDLSGGEKQRVVL 180
           ALY   +V +N+  AL  AG    +  +      ++++L   +    + LSGG++QRV +
Sbjct: 85  ALYPHMSVRKNMSFALDLAGVAKAEVEKKVGEAARILELGPMLERKPKQLSGGQRQRVAI 144

Query: 181 ARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVIEELCQKA 240
            R I +NP IFL DEP   LD      +   L     +    M+  +H       +  K 
Sbjct: 145 GRAIVRNPKIFLFDEPLSNLDAALRVQMRLELLRLHKELQATMIYVTHDQVEAMTMADKV 204

Query: 241 IWLDKGEMRLVG 252
           + L+ G++  VG
Sbjct: 205 VVLNGGKIEQVG 216