Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 344 a.a., methionine import ATP-binding protein MetN from Vibrio cholerae E7946 ATCC 55056

 Score =  129 bits (323), Expect = 2e-34
 Identities = 74/240 (30%), Positives = 140/240 (58%), Gaps = 15/240 (6%)

Query: 280 LLKLENVEKRYVSVDRGIVKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPSK 339
           ++++++V K +   D+ I  A+  I++ I +  IFG++G SGAGK+TL + +  +  P+ 
Sbjct: 1   MIEIKSVNKVFYQGDKQI-HALKDINLFIPQGTIFGVIGSSGAGKSTLIRCVNMLEKPTS 59

Query: 340 GNYEFRLADEWVDMTKVGPLYRGRAKRYIGMLFQEYSLYPHRTILYNLTESIGLEMPGE- 398
           G    ++  + VD+T +       A+R IGM+FQ ++L   RT+  N+  ++ LE+ G+ 
Sbjct: 60  G----QVIVDGVDLTTLSNPQLCAARRNIGMIFQHFNLLSSRTVFENV--ALPLELAGQS 113

Query: 399 --FAKMKAEHTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLILLDEPT 456
               + K    L  VG +E+      E +P+ LS G+K RVA+A+ L  +P ++L DE T
Sbjct: 114 QQHIETKVTELLALVGLSEKR-----ESYPANLSGGQKQRVAIARALASDPKVLLCDEAT 168

Query: 457 GTMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTGKPDEI 516
             +DP T   + E +++   +L+ T ++++H+MD V ++C   A++ GG++++ G   +I
Sbjct: 169 SALDPATTQSILELLKEINRQLNLTILLITHEMDVVKSICHEVAIIGGGELVEKGTVGDI 228



 Score =  105 bits (262), Expect = 3e-27
 Identities = 72/251 (28%), Positives = 124/251 (49%), Gaps = 37/251 (14%)

Query: 3   LLEVKNVSKSY--GDTEV--LKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEPT 58
           ++E+K+V+K +  GD ++  LK+++  + +G + GV+G SGAGKS L+  +  +E  +PT
Sbjct: 1   MIEIKSVNKVFYQGDKQIHALKDINLFIPQGTIFGVIGSSGAGKSTLIRCVNMLE--KPT 58

Query: 59  SGQIIYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWN-NNEITYALKKKIAIMLQ 117
           SGQ+I                                VD    +N    A ++ I ++ Q
Sbjct: 59  SGQVI-----------------------------VDGVDLTTLSNPQLCAARRNIGMIFQ 89

Query: 118 RTFALYGEKTVAENIMEALTAAGYEGKDATEWALNLIKMVKLEHRVAHISRDLSGGEKQR 177
             F L   +TV EN+   L  AG   +        L+ +V L  +      +LSGG+KQR
Sbjct: 90  H-FNLLSSRTVFENVALPLELAGQSQQHIETKVTELLALVGLSEKRESYPANLSGGQKQR 148

Query: 178 VVLARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVIEELC 237
           V +AR +A +P + L DE T  LDP T + +   L E   + N+ +++ +H  +V++ +C
Sbjct: 149 VAIARALASDPKVLLCDEATSALDPATTQSILELLKEINRQLNLTILLITHEMDVVKSIC 208

Query: 238 QKAIWLDKGEM 248
            +   +  GE+
Sbjct: 209 HEVAIIGGGEL 219