Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  169 bits (427), Expect = 3e-46
 Identities = 141/586 (24%), Positives = 268/586 (45%), Gaps = 88/586 (15%)

Query: 1   MLLLEVKNVSKSY----GDTEVLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYE 56
           M LLEVKN+   Y    G    +K+++ ++  G+++GV+G SGAGKS + + +  +    
Sbjct: 1   MSLLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPP 60

Query: 57  PT-SGQIIYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIM 115
            T +G  +Y          +      G   +   E     + F   + +T +L     + 
Sbjct: 61  GTIAGGEVY----------LNGEKISGLSPQAMREVRGSKIGFIFQDPMT-SLNPLFTVE 109

Query: 116 LQRTFALYGEKTVAENIMEALTAAGYEGKDATEWALNLIKMVKL---EHRVAHISRDLSG 172
            Q T  ++    V+              ++A + AL+L+K V +   E+R+       SG
Sbjct: 110 HQLTETIHANMQVS-------------AEEAYQRALSLMKQVGIPQPENRLKQYPHQFSG 156

Query: 173 GEKQRVVLARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEV 232
           G +QRVV+A  +A  P + +ADEPT  LD      + N + E   K+N+  ++ +H   V
Sbjct: 157 GMRQRVVIAIALAGEPDLIIADEPTTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGV 216

Query: 233 IEELCQKAIWLDKGEM-------RLVGESKHVVEE-----------------FMKTVTSM 268
           +  +  +   + +G++       +++G  +H                      +  +   
Sbjct: 217 VSNVTDRVAVMYRGDLVEFGPTAKVLGTPEHPYTRSLISAVPRSDRKLDRFPLVSYIEEA 276

Query: 269 KEFEKVEVKDE--------------LLKLENVEKRYVSVD------RGIVKAVDGIDVSI 308
           KE + ++VK                LLK+ENV  R+V+ D      R  V+A + +  ++
Sbjct: 277 KELKPLDVKSHWLGQSQDHRKYTGPLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAV 336

Query: 309 NEKEIFGLVGVSGAGKTTLSKIIAAVIPPSKGNYEFRLADEWVDMTKVGPLYRGRA-KRY 367
           +E E FGLVG SG+GK+T++++IA +  P+ G   F    E +D+T +   +  R  +R 
Sbjct: 337 HEGETFGLVGESGSGKSTIARVIAGLYQPNAGRVTF----EGIDLTALKSEHERRPLRRQ 392

Query: 368 IGMLFQE--YSLYPHRTILYNLTESIGLEMPGEFAKMKAEHTLVSVGFTEEEAENMLE-- 423
           + M+FQ    S+ P   I   + E I      +  + ++E   +     E      +   
Sbjct: 393 MQMVFQNPYTSMNPRMKIFDIIAEPIRFH---KLTRSESETRQIVNDLLEHVGLGKMAGL 449

Query: 424 KHPSELSVGEKHRVALAQVLIREPHLILLDEPTGTMDPITRNQVAESIQKSRSELDQTYV 483
           K+P E S G++ R+++A+ L   P L++ DEPT  +D   + Q+   ++  + EL+ T +
Sbjct: 450 KYPHEFSGGQRQRISIARALATRPRLLICDEPTSALDVSVQAQILNLLKDLQDELNLTML 509

Query: 484 IVSHDMDFVLNVCDRAALVRGGKIIKTGKPDEIVKILSEEEKDEMI 529
            +SHD+  +  +CDR  +++ G +++    +++      E   ++I
Sbjct: 510 FISHDLPVIRQMCDRVGVMQMGTLLEVAPTEQLFTDPQHEYSKKLI 555