Pairwise Alignments

Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2

Subject, 525 a.a., ABC transporter from Pseudomonas syringae pv. syringae B728a

 Score =  166 bits (421), Expect = 2e-45
 Identities = 141/555 (25%), Positives = 272/555 (49%), Gaps = 68/555 (12%)

Query: 3   LLEVKNVSKSYGDTEVLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGM--EGYEPTSG 60
           L+E++++S ++   +V+ N+S ++  G+ + ++G SG+GKSV  H +  +       T+G
Sbjct: 5   LIEIRDLSVAFNGQKVVSNLSLDVRRGECLALVGESGSGKSVTAHSILQLLPRSGTLTTG 64

Query: 61  QIIYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQRTF 120
            I Y                VG                 ++  +      +IA++ Q   
Sbjct: 65  SITYR-----------GQQLVGA----------------DDRTLRELRGNRIAMIFQEPM 97

Query: 121 -ALYGEKTVAENIMEALTA-AGYEGKDATEWALNLIKMVKL---EHRVAHISRDLSGGEK 175
            +L    +VA+ I E L    G  G++A +  + L+++V +   E R+     +LSGG++
Sbjct: 98  TSLNPLHSVAKQIGETLLLHRGVSGREAQKRIVELLELVGIQQPEKRLKAYPHELSGGQR 157

Query: 176 QRVVLARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVIEE 235
           QRV++A  +A  P + +ADEPT  LD    + +   L E   + N+++++ SH   ++  
Sbjct: 158 QRVMIAMALACEPELLIADEPTTALDVTVQRKILLLLKELQQRLNMSLLLISHDLNLVHS 217

Query: 236 LCQKAIWLDKGEM-------RLVGESKHVVEEFMKTVTSMKEFEKVEVKDELLKLENVEK 288
           + Q+   +  GE+        L    +H     +       E    + ++ +L+++N+ K
Sbjct: 218 VAQRVCVMRAGEIVEQSDCKSLFKSPQHPYSRLLLDAEPAGEPLPRDTRETVLQVDNL-K 276

Query: 289 RYVSVDRGIV-------KAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPSKGN 341
            + S+  GI+       KAVD I +SI   +  G+VG SG+GK+TL + I  ++  S+G+
Sbjct: 277 VWFSLTGGILRRHREYLKAVDDISLSIERGKTLGIVGESGSGKSTLGQAILRLLE-SRGS 335

Query: 342 YEFR-LADEWVDMTKVGPLYRGRAKRYIGMLFQEY--SLYPHRTILYNLTESIGLEMPGE 398
             FR  A + +   ++ P      ++ + ++FQ+   SL P  ++   ++E  GLE+  +
Sbjct: 336 IRFRGQALDGLSQKQMRPW-----RKEMQVVFQDPYGSLSPRMSVAQIISE--GLEVHSQ 388

Query: 399 F--AKMKAE--HTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLILLDE 454
           +  AK  AE    L  VG   +       ++P E S G++ R+A+A+ L+ +P LILLDE
Sbjct: 389 YNPAKCDAEVIRALEEVGIDPQSRH----RYPHEFSGGQRQRIAIARALVLKPALILLDE 444

Query: 455 PTGTMDPITRNQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTGKPD 514
           PT  +D   + QV   +++ + +   TY+ +SHD+  V  +     +V+ GK+++ G   
Sbjct: 445 PTSALDRTVQKQVVALLRELQEKHGLTYLFISHDLAVVKALAHDVIVVKDGKVVERGASH 504

Query: 515 EIVKILSEEEKDEMI 529
           ++ +        E++
Sbjct: 505 DVFEAPQHPYTQELL 519