Pairwise Alignments
Query, 531 a.a., methyl coenzyme M reductase system component A2 from Methanococcus maripaludis S2
Subject, 613 a.a., Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal from Pseudomonas syringae pv. syringae B728a
Score = 142 bits (357), Expect = 5e-38
Identities = 135/531 (25%), Positives = 247/531 (46%), Gaps = 58/531 (10%)
Query: 13 YGDTEVLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEGYEPTSGQIIYHVAYCPHC 72
+G+ E++K VSF L +G+V+ ++G SG+GK+ + L G Y ++ V
Sbjct: 18 HGELEIVKGVSFALEKGEVLALIGESGSGKTTIALALLG---YARRGCKLAGGVVQVGAH 74
Query: 73 ENVEAP-SQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAIMLQRTFALYGEKTVAEN 131
+ + P SQ+ Y+A+S + KK+ + ++G + AE
Sbjct: 75 DMLSLPESQLQGLRGNRVSYIAQSA------AAAFNPAKKLIDQVIEGALIHGLGSRAE- 127
Query: 132 IMEALTAAGYEGKDATEWALNLIKMVKLEHRVAHISRDLSGGEKQRVVLARQIAKNPVIF 191
+EA + L L + R H +SGG+ QRV+ A + +P++
Sbjct: 128 -LEAKAVELFRD-------LALPNPESIGRRYPH---QVSGGQLQRVMAAMALISDPLLV 176
Query: 192 LADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVIEELCQKAIWLDKGEMRLV 251
+ DEPT LD T V A V V SH V+ ++ + + L+ G R++
Sbjct: 177 ILDEPTTALDVTTQIDVLRAFKRVVRDRGATAVYVSHDLAVVAQMADQIVVLNGG--RII 234
Query: 252 GES------KHVVEEFMKTVTSMKEFEKV------EVKDE-LLKLENVEKRYVSVD---R 295
+S K V+ + +++ + +KV VKD LL ++ + Y +
Sbjct: 235 EQSSTAALLKGPVDAYSRSLLAAARPDKVLSPASEVVKDSTLLTIKGLTAGYGKKNLQGM 294
Query: 296 GIVKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPSKGNYEFRLADEWVDMTK 355
+++ ++ ID++I + G++G SG+GK+TL++++A ++ P+ G+ F AD
Sbjct: 295 PMIRVLEDIDLTIRRGQAIGVIGESGSGKSTLARVVAGLLDPAHGSLTFDGAD------- 347
Query: 356 VGPLYRGRAK---RYIGMLFQ--EYSLYPHRTILYNLTESIGLE--MPGEFAKMKAEHTL 408
+ GR + R I M+FQ + +L P +I L + + + G + + + +
Sbjct: 348 LSGTLAGRTEEQFRRIQMVFQNADTALNPMHSISAILARPLKMYFGLKGRALRERIDELM 407
Query: 409 VSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLILLDEPTGTMDPITRNQVA 468
V E AE + P+ELS G+K RV LA+ L +P LIL DE T +D + +
Sbjct: 408 DLVRLPRELAE----RRPNELSGGQKQRVNLARALAAKPDLILCDEVTSALDTVVGACIL 463
Query: 469 ESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTGKPDEIVKI 519
E + + R +L +Y+ +SHD+ V +CD ++ G ++ G + ++
Sbjct: 464 ELLGELRRKLGVSYLFISHDISTVRALCDDIVVMYSGHKVEEGSREAFSRV 514
Score = 78.6 bits (192), Expect = 6e-19
Identities = 60/234 (25%), Positives = 112/234 (47%), Gaps = 15/234 (6%)
Query: 294 DRGIVKAVDGIDVSINEKEIFGLVGVSGAGKTTLSKIIAAVIPPSKGNYEFRLADEWVDM 353
D G ++ V G+ ++ + E+ L+G SG+GKTT++ +A + +G +LA V +
Sbjct: 17 DHGELEIVKGVSFALEKGEVLALIGESGSGKTTIA--LALLGYARRG---CKLAGGVVQV 71
Query: 354 TKVGPL---------YRGRAKRYIGMLFQEYSLYPHRTILYNLTESIGLEMPGEFAKMKA 404
L RG YI + P + ++ + E + G A+++A
Sbjct: 72 GAHDMLSLPESQLQGLRGNRVSYIAQ-SAAAAFNPAKKLIDQVIEGALIHGLGSRAELEA 130
Query: 405 EHTLVSVGFTEEEAENMLEKHPSELSVGEKHRVALAQVLIREPHLILLDEPTGTMDPITR 464
+ + E++ ++P ++S G+ RV A LI +P L++LDEPT +D T+
Sbjct: 131 KAVELFRDLALPNPESIGRRYPHQVSGGQLQRVMAAMALISDPLLVILDEPTTALDVTTQ 190
Query: 465 NQVAESIQKSRSELDQTYVIVSHDMDFVLNVCDRAALVRGGKIIKTGKPDEIVK 518
V + ++ + T V VSHD+ V + D+ ++ GG+II+ ++K
Sbjct: 191 IDVLRAFKRVVRDRGATAVYVSHDLAVVAQMADQIVVLNGGRIIEQSSTAALLK 244
Score = 70.9 bits (172), Expect = 1e-16
Identities = 67/278 (24%), Positives = 111/278 (39%), Gaps = 46/278 (16%)
Query: 3 LLEVKNVSKSYGDTE--------VLKNVSFELNEGDVMGVLGRSGAGKSVLLHMLRGMEG 54
LL +K ++ YG VL+++ + G +GV+G SG+GKS L ++ G+
Sbjct: 276 LLTIKGLTAGYGKKNLQGMPMIRVLEDIDLTIRRGQAIGVIGESGSGKSTLARVVAGL-- 333
Query: 55 YEPTSGQIIYHVAYCPHCENVEAPSQVGKKCECETEYVAKSVDFWNNNEITYALKKKIAI 114
+P G + + + + + + E E + + N + I+
Sbjct: 334 LDPAHGSLTF--------DGADLSGTLAGRTE---EQFRRIQMVFQNADTALNPMHSISA 382
Query: 115 MLQRTFALYGEKTVAENIMEALTAAGYEGKDATEWALNLIKMVKLEHRVAHIS-RDLSGG 173
+L R +Y G +G+ E L+ +V+L +A +LSGG
Sbjct: 383 ILARPLKMY---------------FGLKGRALRERIDELMDLVRLPRELAERRPNELSGG 427
Query: 174 EKQRVVLARQIAKNPVIFLADEPTGTLDPKTAKFVHNALTEAVIKHNIAMVITSHWPEVI 233
+KQRV LAR +A P + L DE T LD + L E K ++ + SH +
Sbjct: 428 QKQRVNLARALAAKPDLILCDEVTSALDTVVGACILELLGELRRKLGVSYLFISHDISTV 487
Query: 234 EELCQKAIWLDKGEMRLVGESKHVVEEFMKTVTSMKEF 271
LC + + G H VEE + S F
Sbjct: 488 RALCDDIVVMYSG---------HKVEEGSREAFSRVPF 516